Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31044
         (374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92829-16|CAE46671.1|  284|Caenorhabditis elegans Hypothetical p...    26   7.6  
Z92829-10|CAB07350.2|  319|Caenorhabditis elegans Hypothetical p...    26   7.6  
Z92829-8|CAB07348.1|  305|Caenorhabditis elegans Hypothetical pr...    26   7.6  
Z92804-6|CAE46675.1|  284|Caenorhabditis elegans Hypothetical pr...    26   7.6  
AF040655-9|AAB95038.1|  288|Caenorhabditis elegans Hypothetical ...    26   7.6  

>Z92829-16|CAE46671.1|  284|Caenorhabditis elegans Hypothetical
           protein K05D4.9 protein.
          Length = 284

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 INTMLPSIILFFSIKCL 351
           + T+ PSI LFF + CL
Sbjct: 223 VQTIFPSIFLFFPVSCL 239


>Z92829-10|CAB07350.2|  319|Caenorhabditis elegans Hypothetical
           protein F10A3.15 protein.
          Length = 319

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 INTMLPSIILFFSIKCL 351
           + T+ PSI LFF + CL
Sbjct: 257 VQTIFPSIFLFFPVSCL 273


>Z92829-8|CAB07348.1|  305|Caenorhabditis elegans Hypothetical
           protein F10A3.12 protein.
          Length = 305

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 INTMLPSIILFFSIKCL 351
           + T+ PSI LFF + CL
Sbjct: 243 VQTIFPSIFLFFPVSCL 259


>Z92804-6|CAE46675.1|  284|Caenorhabditis elegans Hypothetical
           protein K05D4.9 protein.
          Length = 284

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 INTMLPSIILFFSIKCL 351
           + T+ PSI LFF + CL
Sbjct: 223 VQTIFPSIFLFFPVSCL 239


>AF040655-9|AAB95038.1|  288|Caenorhabditis elegans Hypothetical
           protein T24E12.3 protein.
          Length = 288

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 233 GTYGHTARLPHGTPTTKRHRFNGMPCKL 150
           G Y  TARLP  + T KR R    P K+
Sbjct: 162 GAYSETARLPTTSTTIKRSRKRKDPRKI 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,795,488
Number of Sequences: 27780
Number of extensions: 145891
Number of successful extensions: 382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)