Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31043
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0133 + 16477502-16479475                                         30   2.3  
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317...    28   6.9  

>01_04_0133 + 16477502-16479475
          Length = 657

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -1

Query: 148 HASLSTIPSAHSRIYQLRKMMPDSFTKNTTTMLNYYLKLYYYSTAA 11
           + ++S +PSA S I++L   MPD  T    TMLN Y+K    + AA
Sbjct: 188 YGAVSQVPSARS-IFEL---MPDRNTVTWNTMLNCYVKAGMINMAA 229


>01_01_0420 +
           3175544-3176696,3177035-3178581,3179623-3179688,
           3179892-3179999
          Length = 957

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 353 TNSGSQWCAVCPNNAPN 403
           +NSG+QWC    N++PN
Sbjct: 229 SNSGAQWCDALANSSPN 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,310,314
Number of Sequences: 37544
Number of extensions: 297046
Number of successful extensions: 448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)