Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31043
         (751 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011161-1|AAR82829.1|  876|Drosophila melanogaster AT20558p pro...    32   0.73 
AE013599-3553|AAF46964.2|  922|Drosophila melanogaster CG9899-PA...    32   0.73 
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P...    29   6.8  
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P...    29   6.8  

>BT011161-1|AAR82829.1|  876|Drosophila melanogaster AT20558p
           protein.
          Length = 876

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 192 CSNRTVPALICTRDVTLVYQQYRVPILEFTNCEK 91
           C N+ +PA+I +  + LV  QYR+ I  +  C K
Sbjct: 640 CGNKCIPAIINSAHIALVSGQYRLAIQTYERCLK 673


>AE013599-3553|AAF46964.2|  922|Drosophila melanogaster CG9899-PA
           protein.
          Length = 922

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 192 CSNRTVPALICTRDVTLVYQQYRVPILEFTNCEK 91
           C N+ +PA+I +  + LV  QYR+ I  +  C K
Sbjct: 640 CGNKCIPAIINSAHIALVSGQYRLAIQTYERCLK 673


>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
            isoform B protein.
          Length = 2922

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -3

Query: 164  SVHVTSR*FINNTECPFSNLPTAKNDARL--IH*KHNNDVKLLLKIIL 27
            +V +T R  IN+  CPF  LP   N+A+    H ++ +++ + LK IL
Sbjct: 2555 TVQITDR-SINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSIL 2601


>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
            isoform A protein.
          Length = 2594

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -3

Query: 164  SVHVTSR*FINNTECPFSNLPTAKNDARL--IH*KHNNDVKLLLKIIL 27
            +V +T R  IN+  CPF  LP   N+A+    H ++ +++ + LK IL
Sbjct: 2227 TVQITDR-SINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSIL 2273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,235,581
Number of Sequences: 53049
Number of extensions: 574459
Number of successful extensions: 922
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)