Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31040
(638 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 174 1e-44
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 121 1e-28
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 121 1e-28
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 121 1e-28
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 121 1e-28
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 72 6e-14
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 38 0.001
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 32 0.061
SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2 |Sch... 29 0.43
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 28 1.3
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 27 1.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 2.3
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 3.0
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 25 7.0
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 25 9.2
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 174 bits (423), Expect = 1e-44
Identities = 83/89 (93%), Positives = 87/89 (97%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 110
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 139
Score = 174 bits (423), Expect = 1e-44
Identities = 83/89 (93%), Positives = 87/89 (97%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 127 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 186
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215
Score = 174 bits (423), Expect = 1e-44
Identities = 83/89 (93%), Positives = 87/89 (97%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 203 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 262
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291
Score = 174 bits (423), Expect = 1e-44
Identities = 83/89 (93%), Positives = 87/89 (97%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKE
Sbjct: 279 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKE 338
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 367
Score = 168 bits (408), Expect = 7e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 102
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
K+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLE 127
Score = 168 bits (408), Expect = 7e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
K+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLE 203
Score = 168 bits (408), Expect = 7e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 254
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
K+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 255 KSKIQDKEGIPPDQQRLIFAGKQLE 279
Score = 168 bits (408), Expect = 7e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 330
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
K+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 331 KSKIQDKEGIPPDQQRLIFAGKQLE 355
Score = 121 bits (291), Expect = 1e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 99 bits (238), Expect = 3e-22
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 83.4 bits (197), Expect = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 102
Score = 83.4 bits (197), Expect = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178
Score = 83.4 bits (197), Expect = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 254
Score = 83.4 bits (197), Expect = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 330
Score = 73.3 bits (172), Expect = 3e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 107
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 58.0 bits (134), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGM 334
EDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 355 EDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 51.6 bits (118), Expect = 9e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNV 26
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGM 561
+IQKESTLHLVLRLRGG+
Sbjct: 364 NIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 121 bits (291), Expect = 1e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 99 bits (238), Expect = 3e-22
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 73.3 bits (172), Expect = 3e-14
Identities = 37/46 (80%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 137
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 364
EDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 51.6 bits (118), Expect = 9e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNV 26
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG-MQIFVKTLTGK 591
+IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 60 NIQKESTLHLVLRLRGGIIEPSLKALASK 88
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 121 bits (291), Expect = 1e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 99 bits (238), Expect = 3e-22
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 73.3 bits (172), Expect = 3e-14
Identities = 37/46 (80%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 137
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 364
EDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 51.6 bits (118), Expect = 9e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNV 26
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG-MQIFVKTLTGK 591
+IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 60 NIQKESTLHLVLRLRGGIIEPSLKALASK 88
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 121 bits (291), Expect = 1e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 99 bits (238), Expect = 3e-22
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 77.4 bits (182), Expect = 2e-15
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG K KT T + + V
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----GKKRKKKTYTTPKKIKHKHKKV 98
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLKTDAP-CQTTTFKKNPHSILYC 317
+ + + D + K+L+ + P C +TF N LYC
Sbjct: 99 ELAVLKYYKVEDDG-----SVKRLRRECPNCGASTFMANHKDRLYC 139
Score = 57.2 bits (132), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG 331
EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 51.6 bits (118), Expect = 9e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNV 26
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG 558
+IQKESTLHLVLRLRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 121 bits (291), Expect = 1e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 99 bits (238), Expect = 3e-22
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 77.4 bits (182), Expect = 2e-15
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG K KT T + + V
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----GKKRKKKTYTTPKKIKHKHKKV 98
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLKTDAP-CQTTTFKKNPHSILYC 317
+ + + D + K+L+ + P C +TF N LYC
Sbjct: 99 ELAVLKYYKVEDDG-----SVKRLRRECPNCGASTFMANHKDRLYC 139
Score = 57.2 bits (132), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG 331
EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 51.6 bits (118), Expect = 9e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE+SDTI+NV
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNV 26
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG 558
+IQKESTLHLVLRLRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 72.1 bits (169), Expect = 6e-14
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 508
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESY 59
Score = 68.9 bits (161), Expect = 6e-13
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTD 263
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADD 53
Score = 41.9 bits (94), Expect = 8e-05
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 104
LI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 43 LIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 29.1 bits (62), Expect = 0.57
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
M I VKTLTGK I L+++ +D + +
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRI 26
Score = 29.1 bits (62), Expect = 0.57
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 257 DGRTLSDYNIQKESTLHLVLRLRGG 331
D + Y+++ S LHLVL LRGG
Sbjct: 52 DDKNAESYHLEGGSVLHLVLALRGG 76
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG 558
H++ S LHLVL LRGG
Sbjct: 60 HLEGGSVLHLVLALRGG 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 132 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQTTTFKKN 296
GK LE+E ++T +K ++ +PP++Q++I G QLK D + K N
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPN 64
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 359 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYTFKKN 523
GK LE+E ++T +K ++ +PP++Q++I G QL+D L K N
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPN 64
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 32.3 bits (70), Expect = 0.061
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 508
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTY 62
Score = 30.7 bits (66), Expect = 0.19
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 95
LI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 46 LIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
Score = 30.3 bits (65), Expect = 0.25
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQTTT 284
+ + +K + + V++ ++ +K I I ++QRLI+AG+ LK + +T
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 285 FKKNPHSI 308
++ HSI
Sbjct: 64 I-QDGHSI 70
>SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 29.5 bits (63), Expect = 0.43
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1
Query: 296 ILFECCSLTRCVRLQLLASKDETLLIRRNSFFVLDLR 186
ILFE C + R+Q S E LIR S FV D R
Sbjct: 16 ILFEACRIGLLPRVQRRLSDHERSLIRAGSVFVWDER 52
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 108 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQ 275
+I V T+ K +V + T+ +K I P D+ +LI AG+ L+ + P +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLE 60
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +2
Query: 26 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRKNSDRKDHHFGSRSFGH 169
G R V L ++H P + A+ ++N HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +1
Query: 271 VRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGH 396
V L ++H P + A+ +EN HHF R F +
Sbjct: 149 VLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 92 SSWRHADLRKNSDRKD-HHFGSRSFGHN*ECEGEDPRQRRNSS*STASH 235
SS+ H +KNS R H + S G+N + E +Q SS +T+SH
Sbjct: 123 SSFDHDYRQKNSPRNSIHRLSNISIGNN-PIDFESSQQNNPSSLNTSSH 170
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 328 STKTQYKMECGFFLNV 281
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 101 STKTQYKMECGFFLNV 54
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 555 STKTQYKMQCGFFLNV*SDNVRPSSSCLPAKMR 457
S +TQYKM+C +NV + V S L + R
Sbjct: 298 SLETQYKMECAVLMNVKNGIVNDSLPNLVPEQR 330
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 168 TIENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQTTTFKKNPHSI 308
+ EN+ A G+PP Q L A Q QTT+F+ N + +
Sbjct: 878 SFENLSANAASPYGLPPQQTPLTNAATQ-------QTTSFQSNANKV 917
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 9.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 61 KKNPHSILYCVFVEAC 108
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
Score = 25.0 bits (52), Expect = 9.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 KKNPHSILYCVFVEAC 335
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,889,387
Number of Sequences: 5004
Number of extensions: 62440
Number of successful extensions: 272
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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