Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31040
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 175 2e-44
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 128 5e-30
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 123 1e-28
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 2e-28
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 73 2e-13
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 42 4e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 39 0.004
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 38 0.005
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.021
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.20
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 31 0.60
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.4
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 29 2.4
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.2
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 29 3.2
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_38971| Best HMM Match : SRCR (HMM E-Value=0) 29 4.2
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 28 5.6
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_3245| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_21237| Best HMM Match : HATPase_c (HMM E-Value=1.9e-12) 28 5.6
SB_17568| Best HMM Match : Ldl_recept_a (HMM E-Value=0.04) 28 7.4
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 27 9.7
SB_12272| Best HMM Match : ComC (HMM E-Value=1.7) 27 9.7
SB_7311| Best HMM Match : Dynein_heavy (HMM E-Value=0.018) 27 9.7
SB_26232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 110
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 139
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 127 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 186
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 203 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 262
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 279 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 338
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 367
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 355 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 414
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 415 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 443
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 431 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 490
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 491 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 519
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLE 127
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLE 203
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLE 279
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 330
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLE 355
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 406
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLE 431
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 423 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 482
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLE 507
Score = 122 bits (295), Expect = 2e-28
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 101 bits (242), Expect = 5e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 330
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 364 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 406
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 440 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 482
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 104
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 499 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG 331
EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 507 EDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENV 26
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG 558
+IQKESTLHLVLRLRGG
Sbjct: 516 NIQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 110
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 139
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 127 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 186
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 203 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 262
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291
Score = 175 bits (427), Expect = 2e-44
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE
Sbjct: 279 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 338
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
GIPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 367
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLE 127
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLE 203
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLE 279
Score = 169 bits (412), Expect = 1e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 330
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQLK 257
KAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLE 355
Score = 122 bits (295), Expect = 2e-28
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 101 bits (242), Expect = 5e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 330
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 104
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG 331
EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 355 EDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENV 26
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG 558
+IQKESTLHLVLRLRGG
Sbjct: 364 NIQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 128 bits (308), Expect = 5e-30
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 182
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+V
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESV 101
Query: 183 KAKIQDKEGIPPDQQRLIFAGKQL 254
K KIQ++EGIPP QRL++ ++L
Sbjct: 102 KEKIQNREGIPPKVQRLLYEEEEL 125
Score = 126 bits (305), Expect = 1e-29
Identities = 63/98 (64%), Positives = 77/98 (78%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
EDGRTLSDYNIQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+VK KIQ++E
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNRE 109
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKKNPHCILYCV 547
GIPP QRL++ ++L D R+L+DY K+ L+ +
Sbjct: 110 GIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFLI 147
Score = 122 bits (295), Expect = 2e-28
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 101 bits (242), Expect = 5e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 636
+IQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+V
Sbjct: 60 NIQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESV 101
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENV 26
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 89
L++ ++L D R+L+DYNI++ S LHL L
Sbjct: 118 LLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 123 bits (296), Expect = 1e-28
Identities = 60/67 (89%), Positives = 61/67 (91%)
Frame = +2
Query: 320 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 499
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 500 SDYTFKK 520
SDY +K
Sbjct: 135 SDYNIQK 141
Score = 101 bits (243), Expect = 4e-22
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = +3
Query: 93 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 129
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +1
Query: 547 LRGGMQIFVKTLTGKTITLEVEASDTIENV 636
L MQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENV 104
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQK 65
LIFAGKQLEDGRTLSDYNIQK
Sbjct: 121 LIFAGKQLEDGRTLSDYNIQK 141
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQK 292
EDGRTLSDYNIQK
Sbjct: 129 EDGRTLSDYNIQK 141
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 122 bits (295), Expect = 2e-28
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 512 FKK 520
+K
Sbjct: 61 IQK 63
Score = 101 bits (242), Expect = 5e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLK 257
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 104
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGG 331
EDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 559 MQIFVKTLTGKTITLEVEASDTIENV 636
MQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENV 26
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGG 558
+IQKESTLHLVLRLRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 107
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 9 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 EDGRTLSDYNIQKESTLHLVLRLRGGM 334
EDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 17 EDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2
Query: 437 IPPDQQRLIFAGKQLEDGRTLSDYTFKK 520
IPPDQQRLIFAGKQLEDGRTLSDY +K
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQK 29
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 508 HIQKESTLHLVLRLRGGM 561
+IQKESTLHLVLRLRGG+
Sbjct: 26 NIQKESTLHLVLRLRGGV 43
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 210 IPPDQQRLIFAGKQLK 257
IPPDQQRLIFAGKQL+
Sbjct: 2 IPPDQQRLIFAGKQLE 17
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 338 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 496
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDT 126
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 111 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTD 263
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L +
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDE 124
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 104
L+F G+ L D T I +TLHL++RL GG
Sbjct: 114 LVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 508
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 509 TFKKN 523
+ K+N
Sbjct: 61 SVKEN 65
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQTTT 284
M++ V G TL+V +EN +A ++ + G+P + L G QL +D T
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQL-SDLKKTLTA 59
Query: 285 FKKNPHSILYCV 320
+ + ++ V
Sbjct: 60 YSVKENDVILMV 71
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 335 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 512 FKKNPHCIL 538
K+ CI+
Sbjct: 67 LKQG--CIV 73
Score = 35.1 bits (77), Expect = 0.049
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQTTT 284
Q+F T TL +D + +K++I+ K GIP D QRL F K+L DA
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 285 FKK 293
K+
Sbjct: 67 LKQ 69
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 287 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 460
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 461 IFAGKQLEDGRTL 499
I K + +L
Sbjct: 79 IIGKKMAKPNESL 91
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 60 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 233
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 234 IFAGKQLK 257
I K K
Sbjct: 79 IIGKKMAK 86
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYT 511
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L ++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Query: 512 FKKN 523
N
Sbjct: 47 GASN 50
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTD 263
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+ +
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDE 39
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.3 bits (75), Expect = 0.085
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 105 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 206
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.085
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 332 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 433
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 434 GIPPDQQRLIFAGKQLEDGRTLSDYTFKKN 523
GIP ++QRLIF GK L+D + L ++ N
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFDGASN 30
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +2
Query: 338 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 505
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICE 240
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 66 ESTLHLVLRLRGGM 107
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 293 ESTLHLVLRLRGGM 334
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 520 ESTLHLVLRLRGGM 561
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 66 ESTLHLVLRLRGGM 107
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 293 ESTLHLVLRLRGGM 334
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 520 ESTLHLVLRLRGGM 561
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 126 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPC 272
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+ + C
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQALSKC 148
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 353 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 484
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 29.1 bits (62), Expect = 3.2
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = +3
Query: 3 LIFAGKQLEDGRTLSDYNIQKES-TLHLVLRLRGGMQIFVKTLTGKTITLEVEAS-DTIE 176
LI+AGK L D L +YNI ++S + +V + + TI AS T
Sbjct: 112 LIYAGKILNDDNPLKEYNIDEKSFVVIMVAKPKPAPAAVAPAPVTTTIPQAATASPSTQA 171
Query: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLKTDAPCQTTTFKKNPHSILYCVFVEACRSS 344
+ A+ K PD+ K T+ TT P + ++E S+
Sbjct: 172 SSTAQEDSKPEAKPDE------AKSTSTETAASATTTASTPAASTPRSYIEEAESA 221
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 110 DLRKNSDRKDHHFGS--RSFGHN*ECEGEDPRQRRNSS*STASHLCWQAAEDGRTL---S 274
DLR+ + GS R GH E EGE RRN + + S C ++ D L S
Sbjct: 951 DLRRENTYSGSDGGSVARDEGHLAEKEGEGEADRRNGNQTVESQACAPSSVDPSALGVAS 1010
Query: 275 DYNIQ 289
DY+ +
Sbjct: 1011 DYHTE 1015
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 359 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 487
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 132 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAG 245
G T E+E A +++E + I GIP D+Q L+ G
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICG 48
>SB_38971| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2436
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 480 WKTDARCQTTHSKRIHTASCTASSWRHADLRENSD 584
W +C T S A+C S WR A+ NSD
Sbjct: 484 WMDSVKCNGTESS---LAACRQSGWRFANCSHNSD 515
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 299 WILFECCSLTRCVRLQLLASKDETLLIRRNSFFVL 195
W+ +CC LT + + A DE IR++ F V+
Sbjct: 68 WVNIDCCPLTFLLYYGISAILDECFAIRKDIFVVV 102
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/89 (24%), Positives = 36/89 (40%)
Frame = +1
Query: 259 RTHLVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHN*ECEGEDPRQGRN 438
R H R ++ R HT + ++ RH N+ R+ S+ + + R
Sbjct: 544 RGHTRRSSNTTRSHTKRSSNTTRRHTGRSSNTTRRHTRRSSKQLAVTQDGQVTTRGHTRR 603
Query: 439 SS*STASHLCWQAAGRRTHVVRLHIQKES 525
SS +T SH R +H R H ++ S
Sbjct: 604 SSNTTRSH-----TRRSSHTTRGHTRRSS 627
>SB_3245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 299 WILFECCSLTRCVRLQLLASKDETLLIRRNSFFVL 195
W+ +CC LT + + A DE IR++ F V+
Sbjct: 12 WVNIDCCPLTFLLYYGISAILDECFAIRKDIFVVV 46
>SB_21237| Best HMM Match : HATPase_c (HMM E-Value=1.9e-12)
Length = 328
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -2
Query: 538 QDAVWILFEC----VV*QRASVFQLLASKDETLLIRRNSFLVLDLRLHILNCVRSFYF 377
Q+ +W + E V Q+ QLLAS+++ + +RN F+ + L +L +FYF
Sbjct: 31 QNKIWAVAEIEKKYAVNQKQKEIQLLASENKIKIFQRNGFIASSI-LFLLLFGTAFYF 87
>SB_17568| Best HMM Match : Ldl_recept_a (HMM E-Value=0.04)
Length = 189
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 406 CEGEDPRQGRNSS*STASHLCWQAAGRRTHVVRLHIQKE-STLHLVLRLRGGMQIFVKTL 582
C+G D G+ + T L Q +R H + L QK+ L L L + + ++
Sbjct: 109 CDGSDEYDGKVNCPDTCKELYKQEFEKRRHEIELAKQKKLEDLRLQLEQKKQVVAELQAT 168
Query: 583 TGKTITLEVEASD 621
K +E EA D
Sbjct: 169 KDKVEAVEKEAKD 181
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 182
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 183 KAKIQDKEGIPP 218
KA ++ K PP
Sbjct: 386 KATLRLKAKGPP 397
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 323 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 496
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLT 768
>SB_12272| Best HMM Match : ComC (HMM E-Value=1.7)
Length = 267
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 439 NSFLVLDLRLHILNCVRSFYFQSDGLSGQSFHEDLHASTKTQYKMECGFFL 287
N+F+V+ +R +N Q DG +G+ + + TKTQ FFL
Sbjct: 46 NAFVVVGIRAGFVNNC-----QKDGFAGKKHRDSCYCQTKTQKHFIQQFFL 91
>SB_7311| Best HMM Match : Dynein_heavy (HMM E-Value=0.018)
Length = 188
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 195 QDKEGIPPDQQRLIFAGKQLKTDAPCQTTTFKKNPHSI 308
+D + I Q +++F + PC+T KK PH +
Sbjct: 101 RDTKAIGESQAKVLFDSLPVMWLCPCKTEDIKKRPHYV 138
>SB_26232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 77 PSCTASSWRHADLRKNSDRK 136
P+CT+ RH D+R+NS R+
Sbjct: 2 PTCTSFGNRHEDVRRNSARR 21
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,230,186
Number of Sequences: 59808
Number of extensions: 496848
Number of successful extensions: 1748
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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