Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31039
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   4.0  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    24   5.3  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    24   5.3  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.3  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   7.0  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 525  HNPGQLFTRTGPGMAGKFPHRHTTTER 445
            H     F+RT P   G F   HT  +R
Sbjct: 1850 HEQADTFSRTIPFFGGNFSPEHTELQR 1876


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 525  HNPGQLFTRTGPGMAGKFPHRHTTTER 445
            H     F+RT P   G F   HT  +R
Sbjct: 1851 HEQADTFSRTIPFFGGNFSPEHTELQR 1877


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = -1

Query: 218  LNCYQWKVHSEVYQHSLSLGDRHSIYRASIESFCFVGTRNINNCENV 78
            +  +Q + H EV  H   +   H  +R  +    F  + +  NC  V
Sbjct: 920  IGAWQSRKHGEVNFHLSQIISGHGFFRKYLADMKFTSSPDCPNCPGV 966



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 152  ADHLSLRNADILR 190
            AD+  LRNAD+LR
Sbjct: 1039 ADNAQLRNADVLR 1051


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 6/29 (20%)
 Frame = -1

Query: 542 THTSFCTIPVS------YSHELDRAWREN 474
           ++T +  +PV+      Y+HE +R WR+N
Sbjct: 216 SNTDYVIVPVANPDGYVYTHEQNRLWRKN 244


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 6/29 (20%)
 Frame = -1

Query: 542 THTSFCTIPVS------YSHELDRAWREN 474
           ++T +  +PV+      Y+HE +R WR+N
Sbjct: 216 SNTDYVIVPVANPDGYVYTHEQNRLWRKN 244


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -3

Query: 444 NIIMINIIYCNFVLGETLKTIFEFYFCS 361
           N++++N+ +C   +  +  +I +  FCS
Sbjct: 148 NLVLVNVGFCPTFVRNSRTSIIDLTFCS 175


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 537 YELLHNPGQLFTRTGPGMAGKF 472
           Y+LL  PG L  R    MAG +
Sbjct: 25  YDLLFGPGSLLYRPPNSMAGDY 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,700
Number of Sequences: 2352
Number of extensions: 12563
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)