Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31039
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical p...    94   7e-20
Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical pr...    94   7e-20

>Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 45/73 (61%), Positives = 50/73 (68%)
 Frame = -3

Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
           Q S R VV  A  +G+P PA S+ALAFYDGY S V+PANLLQAQRDYFGAHTYELL  PG
Sbjct: 404 QDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYELLAKPG 463

Query: 513 QLFTRTGPGMAGK 475
                   G  G+
Sbjct: 464 TWVHTNWTGTGGR 476



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -2

Query: 508 IHTNWTGHGGKISAS 464
           +HTNWTG GG+++++
Sbjct: 466 VHTNWTGTGGRVTSN 480


>Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 45/73 (61%), Positives = 50/73 (68%)
 Frame = -3

Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
           Q S R VV  A  +G+P PA S+ALAFYDGY S V+PANLLQAQRDYFGAHTYELL  PG
Sbjct: 404 QDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYELLAKPG 463

Query: 513 QLFTRTGPGMAGK 475
                   G  G+
Sbjct: 464 TWVHTNWTGTGGR 476



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -2

Query: 508 IHTNWTGHGGKISAS 464
           +HTNWTG GG+++++
Sbjct: 466 VHTNWTGTGGRVTSN 480


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,431,994
Number of Sequences: 27780
Number of extensions: 270045
Number of successful extensions: 587
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)