Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31039
(695 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02360.2 68416.m00220 6-phosphogluconate dehydrogenase family... 72 3e-13
At3g02360.1 68416.m00219 6-phosphogluconate dehydrogenase family... 72 3e-13
At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family... 71 7e-13
At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family... 71 1e-12
At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family... 71 1e-12
At5g55470.1 68418.m06909 sodium proton exchanger / Na+/H+ exchan... 30 1.7
At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative / cel... 29 2.2
At4g02290.1 68417.m00310 glycosyl hydrolase family 9 protein sim... 29 2.9
At1g02800.1 68414.m00237 endo-1,4-beta-glucanase / cellulase (CE... 29 2.9
At5g06330.1 68418.m00709 hairpin-responsive protein, putative (H... 27 9.0
At3g27870.1 68416.m03475 haloacid dehalogenase-like hydrolase fa... 27 9.0
At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein sim... 27 9.0
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin... 27 9.0
>At3g02360.2 68416.m00220 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
;similar to 6-phosphogluconate dehydrogenase GB:BAA22812
GI:2529229 [Glycine max]
Length = 486
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3
Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
QS+ R VV A G+ P +SA+LA++D YR LPANL+QAQRDYFGAHTYE G
Sbjct: 412 QSAWRRVVCLAINSGISTPGMSASLAYFDSYRRERLPANLVQAQRDYFGAHTYERTDVEG 471
Query: 513 QLFT 502
T
Sbjct: 472 SFHT 475
>At3g02360.1 68416.m00219 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
;similar to 6-phosphogluconate dehydrogenase GB:BAA22812
GI:2529229 [Glycine max]
Length = 486
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3
Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
QS+ R VV A G+ P +SA+LA++D YR LPANL+QAQRDYFGAHTYE G
Sbjct: 412 QSAWRRVVCLAINSGISTPGMSASLAYFDSYRRERLPANLVQAQRDYFGAHTYERTDVEG 471
Query: 513 QLFT 502
T
Sbjct: 472 SFHT 475
>At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = -3
Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
Q++ R VV A G+ P + A+LA++D YR LPANL+QAQRD FGAHTYE PG
Sbjct: 414 QAAWRRVVGLAVSAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPG 473
Query: 513 QLFT 502
T
Sbjct: 474 AYHT 477
>At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = -3
Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
Q++ R VV A G+ P + A+LA++D YR LPANL+QAQRD FGAHTYE PG
Sbjct: 414 QAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPG 473
Query: 513 QLFT 502
T
Sbjct: 474 AYHT 477
>At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = -3
Query: 693 QSSLRTVVAQAALVGVPAPALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPG 514
Q++ R VV A G+ P + A+LA++D YR LPANL+QAQRD FGAHTYE PG
Sbjct: 414 QAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPG 473
Query: 513 QLFT 502
T
Sbjct: 474 AYHT 477
>At5g55470.1 68418.m06909 sodium proton exchanger / Na+/H+ exchanger
4 (NHX4) identical to Na+/H+ exchanger 4 [Arabidopsis
thaliana] GI:19919844; Member of The Monovalent
Cation:Proton Antiporter (CPA1) Family, PMID:11500563
Length = 529
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 465 RHTTTERNIIMINIIYCNFVLGE--TLKTIFEFYFCSII 355
RH+TT IM+ + Y +++L E +L I +FC ++
Sbjct: 244 RHSTTRELAIMVLMAYLSYMLAELFSLSGILTVFFCGVL 282
>At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol.
40, 323-332 (1999))
Length = 620
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 636 ALSAALAFYDGYRSGVLPANLLQAQRDYFG 547
ALS +L F++ RSGVLP N R + G
Sbjct: 29 ALSKSLLFFEAQRSGVLPRNQRVTWRSHSG 58
>At4g02290.1 68417.m00310 glycosyl hydrolase family 9 protein
similar to endo-1,4-beta glucanase; ATCEL2 GI:3132891
from [Arabidopsis thaliana]
Length = 516
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 636 ALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLH-NPGQLFTRTGPGMAGKFPHRH 460
AL+ ++ F++G RSG LP+N + R G LH + + G + FP
Sbjct: 56 ALTKSILFFEGQRSGKLPSNQRMSWRRDSGLSDGSALHVDLVGGYYDAGDNIKFGFPMAF 115
Query: 459 TTT 451
TTT
Sbjct: 116 TTT 118
>At1g02800.1 68414.m00237 endo-1,4-beta-glucanase / cellulase (CEL2)
identical to endo-1,4-beta glucanase; ATCEL2 GI:3132891
from [Arabidopsis thaliana]
Length = 501
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -3
Query: 636 ALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLH-NPGQLFTRTGPGMAGKFPHRH 460
ALS ++ F++G RSG LP N R G L+ + + G M FP
Sbjct: 47 ALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAF 106
Query: 459 TTT 451
TTT
Sbjct: 107 TTT 109
>At5g06330.1 68418.m00709 hairpin-responsive protein, putative
(HIN1) similar to harpin-induced protein hin1 (
GI:1619321) [Nicotiana tabacum]
Length = 207
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 615 FYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPGQLFTRTGPGMAGKFPHRH 460
F GY V P N +D+ +LH G++ + G + GK+ H H
Sbjct: 126 FVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKY-HLH 176
>At3g27870.1 68416.m03475 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus
musculus} SP|P98200, Homo sapiens SP|O43520,
{Arabidopsis thaliana} SP|P98204; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1174
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 65 CKHP-KHFHNY*YSWYQQNKSFQ*KPDRLSADHLSLRNADILRNVLSIDNNLTKKIQN 235
C+ P +H +++ + Y + K + P ++ L+N D + V+ + TK +QN
Sbjct: 224 CEDPNEHLYSFVGTLYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQN 281
>At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase GI:4972236 from
[Fragaria x ananassa]
Length = 525
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 636 ALSAALAFYDGYRSGVLPANLLQAQRDYFG 547
ALS +L +++ RSG LP N RD+ G
Sbjct: 43 ALSKSLLYFEAQRSGRLPYNQRVTWRDHSG 72
>At1g08420.1 68414.m00931 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344 kelch motif
Length = 1018
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 642 APALSAALAFYDGYRSGVLPANLLQAQRDYFGAHTYELLHNPGQLFTRTGPGMAGKFPHR 463
A A+ + Y G R GVL +LL A+ TY H T + P G+ P R
Sbjct: 424 AAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPP---GRLPGR 480
Query: 462 H-TTTERN 442
+ + ERN
Sbjct: 481 YGFSDERN 488
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,287,864
Number of Sequences: 28952
Number of extensions: 232630
Number of successful extensions: 475
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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