Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31038
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVA 460
           +EE     D+QG + P +D A +E+ +
Sbjct: 689 EEEAMITEDAQGGDAPSADAAESEDAS 715


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +3

Query: 102 TMEN*KLLIVNQQYYFITFDHHILNINKKIKYNTKSSGSQKIRSGLNI 245
           T+   ++  + ++ Y I+F+  + +  KK+KY  +     K R  LNI
Sbjct: 140 TLNGHEIKFIRKEEY-ISFESKVFHKLKKMKYLVEVQDEVKPRGVLNI 186


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 506  FPCHLKNLPHFDSVSMQLLRH*PYH 432
            + CH++N    DSV+ QL+ + P H
Sbjct: 1374 YSCHVENDYGQDSVTHQLIVNAPPH 1398


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 244 IFRPDLIFCDPELLVLYLIFLF 179
           +F PD +F      +LYLIF +
Sbjct: 140 VFVPDYVFFVENEPILYLIFSY 161


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 734 IIGGVTISLAMLYHFGPLSTVKSS 663
           I+G VT+ L M   F   +T K +
Sbjct: 360 IVGAVTVYLIMFIQFDIATTTKGA 383


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 734 IIGGVTISLAMLYHFGPLSTVKSS 663
           I+G VT+ L M   F   +T K +
Sbjct: 185 IVGAVTVYLIMFIQFDIATTTKGA 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,142
Number of Sequences: 336
Number of extensions: 3642
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)