Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31038
         (779 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2)                    31   1.4  
SB_31610| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)                      30   2.4  
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_29963| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)                 29   3.2  
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)                   29   3.2  
SB_54260| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_50703| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_17867| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_33874| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38)                  29   5.6  
SB_21276| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_38766| Best HMM Match : 7tm_1 (HMM E-Value=1e-07)                   28   7.4  
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.8  
SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.8  
SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8)                28   9.8  
SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)         28   9.8  
SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.8  

>SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2)
          Length = 508

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQ 475
           EE+D+ +  +ND   E++PLS  + A++ +SKR Q
Sbjct: 261 EEIDDTD-ERNDELEEKDPLSPSSGAKDDSSKRKQ 294


>SB_31610| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 109

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQVIVTIR 544
           E EE +EE   + + + EEE   ++   EE      + E +   + E  E+ ++   T R
Sbjct: 24  EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEEEEEEEEEEATFR 83

Query: 545 RLLHQVLV 568
           R +   LV
Sbjct: 84  RHVRGALV 91



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
           E EE +EE   + + + EEE   ++   EE   +  + EG+   + E  E+ ++
Sbjct: 18  EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEE 71



 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +2

Query: 362 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
           F +EE +EE   + + + EEE   ++   EE   +  + E +   + E  E+ ++
Sbjct: 11  FHVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEE 65


>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
          Length = 1291

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 503  PCHLKNLPHFDSVSMQLLRH*PYHLEVLPHLDCHF 399
            P H + L H  S   +LLRH P+H  VL H   H+
Sbjct: 1007 PFHYRLLRHH-SFHYRLLRHHPFHYRVLRHHPFHY 1040


>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 283

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
           E+EE +EE   + + + EEE   ++   EE   K  + E +   + E  E+ ++
Sbjct: 204 EVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEEEE 257



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +2

Query: 353 SVLFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
           SV+ E EE +EE   + + + EEE   ++   EE   +  + E +   + E  E+ ++
Sbjct: 192 SVVEEEEEEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEE 249



 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
           E EEV+EE   + + + EEE   ++   EE   +  + E +   + E  E+ ++
Sbjct: 201 EEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEE 254


>SB_29963| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
          Length = 238

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +2

Query: 398 KNDSQGEEEPLSDKASA---EEVASKRNQNEGDSLNDMESLEKFQQVIVTIRRLLHQV 562
           K+D +G++E  + KA     E++    ++   D++ND E++EK QQ++  I     Q+
Sbjct: 138 KSDDEGDDEKKALKAHTQKNEQLVPTNDEVVDDTVNDSETIEK-QQLVERIEEYESQI 194


>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
          Length = 205

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDME 505
           E EE +EE     +  GEEE ++D+      +SK   NE D  N+ +
Sbjct: 107 EEEEEEEEKEEGKEEDGEEEVVTDERGIS--SSKDESNESDESNESD 151


>SB_54260| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 68

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
           E EE +EE   + + + EEE   ++   EE   +  + EG+   + E  E+
Sbjct: 6   EEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEGEEEEEEEEEEE 56


>SB_50703| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 166

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDME 505
           E EEV+EE   + + + EEE   ++   EE   K ++ E +   + E
Sbjct: 51  EEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEDKQEEEDKQEEE 97


>SB_17867| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDS 490
           E EE +EE   K + + EEE   ++   +E  +K+N+N+  S
Sbjct: 20  EEEEEEEEEEEKEEEEEEEEEEEEEEEDKEDDNKKNKNKKSS 61


>SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 531

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 428 LSDKASAEEVASKRNQNEGDSLNDMESLEKFQQVIVTI 541
           +SD ASAE ++SKRN+    SLN +E++      I T+
Sbjct: 3   ISDSASAEFLSSKRNKKR--SLNSIENIVAALSAINTV 38


>SB_33874| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 359 LFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMES 508
           L  I     E+  + + QGE E +  +A  EEV   R + + +++ D+E+
Sbjct: 69  LVNIPSEQSEDDNEVEEQGEAEDIKSEAKKEEVLKIREKVKEENMKDLEA 118


>SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38)
          Length = 550

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +2

Query: 362 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
           FE ++ + +N  K D + +EE LS     +EV++  N N  +S  D++S ++
Sbjct: 143 FEPQDTEIQNVEKGDEE-DEEILSIN---DEVSTNNNNNNEESAEDLDSTKQ 190


>SB_21276| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 364

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +1

Query: 562 TSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVDKGPKWYSIANEMVTPPIITK 741
           T+ D+  G+    E  KR+   L V F   +   + F     P  Y +  E   PP ITK
Sbjct: 31  TARDKSGGSGRTQEANKRVVNFLDVTFDLNRNTYQPFFKPNAPLQY-VHRESNHPPTITK 89

Query: 742 NLP 750
           N+P
Sbjct: 90  NIP 92


>SB_38766| Best HMM Match : 7tm_1 (HMM E-Value=1e-07)
          Length = 625

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 223 FCDPELLVLYLIFL 182
           FCDPE+ VLYL+ L
Sbjct: 560 FCDPEIAVLYLVLL 573


>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 950

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSL 493
           E+ +EE+  +++ + EEE  ++K + + + +K  +   DSL
Sbjct: 643 EKEEEESEEESEEESEEEEETEKVNKDALKAKATEKSNDSL 683


>SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 172

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 601 ETLKRINADLLVEFPAKKPKPELFTVDKGPKWYSIANEMVTPPIITKNLP 750
           E  KR+   L V F   +   + FT    P  Y +  E   PP ITKN+P
Sbjct: 67  EANKRVVIFLDVTFDLNRNTYQPFTKPNAPLQY-VHRESNHPPTITKNIP 115


>SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1200

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 601  ETLKRINADLLVEFPAKKPKPELFTVDKGPKWYSIANEMVTPPIITKNLP 750
            E  KR+   L V F   +   + FT    P  Y +  E   PP ITKN+P
Sbjct: 971  EAKKRVVNFLDVTFDLNRNTYQPFTKPSAPLQY-VHRESNHPPTITKNIP 1019


>SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8)
          Length = 243

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +1

Query: 601 ETLKRINADLLVEFPAKKPKPELFTVDKGPKWYSIANEMVTPPIITKNLP 750
           E  KRI   L V F   +   + FT    P  Y +  E   PP ITKN+P
Sbjct: 138 EANKRIVNFLDVTFDLNRNTYQPFTKPNAPLQY-VHRESNHPPTITKNIP 186


>SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)
          Length = 438

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESL 511
           E EE +EE   + + + EEE   DK   EE   +  + E +   + E +
Sbjct: 37  EEEEEEEEEEEEEEEEEEEEEEEDKEEEEEEEEEEEEEEEEEEEEEEEV 85


>SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 113

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
           E EEV++E   + + + E + ++++   EEV    NQ EG+ +N  E  E
Sbjct: 23  EGEEVNQEEGEEVNEEEEGKEMNEEEEGEEV----NQEEGEEVNQEEGEE 68


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,256,897
Number of Sequences: 59808
Number of extensions: 369872
Number of successful extensions: 1489
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)