Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31038
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050557-1|AAH50557.1| 1208|Homo sapiens timeless homolog (Droso... 31 4.7
AF098162-1|AAC80011.1| 1208|Homo sapiens timeless homolog protein. 31 4.7
AB015597-1|BAA36499.1| 1208|Homo sapiens hTIM1 protein. 31 4.7
X95735-1|CAA65050.1| 572|Homo sapiens zyxin protein. 31 6.1
X94991-1|CAA64447.1| 572|Homo sapiens zyxin protein. 31 6.1
U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid... 31 6.1
U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein. 31 6.1
CR457431-1|CAG33712.1| 572|Homo sapiens ZYX protein. 31 6.1
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ... 31 6.1
BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein. 31 6.1
BC010031-1|AAH10031.1| 572|Homo sapiens zyxin protein. 31 6.1
BC009360-1|AAH09360.1| 572|Homo sapiens zyxin protein. 31 6.1
BC008743-1|AAH08743.1| 572|Homo sapiens zyxin protein. 31 6.1
BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein. 31 6.1
AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HM... 31 6.1
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein. 31 6.1
AC092214-1|AAS07459.1| 572|Homo sapiens unknown protein. 31 6.1
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 30 8.1
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 30 8.1
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 30 8.1
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 30 8.1
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 30 8.1
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 30 8.1
>BC050557-1|AAH50557.1| 1208|Homo sapiens timeless homolog
(Drosophila) protein.
Length = 1208
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLN 496
+EEN P+ DS+ EEE S+ + N+N G SL+
Sbjct: 973 EEENLPEEDSEEEEEGGSEAEQVQGSLVLSNENLGQSLH 1011
>AF098162-1|AAC80011.1| 1208|Homo sapiens timeless homolog protein.
Length = 1208
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLN 496
+EEN P+ DS+ EEE S+ + N+N G SL+
Sbjct: 973 EEENLPEEDSEEEEEGGSEAEQVQGSLVLSNENLGQSLH 1011
>AB015597-1|BAA36499.1| 1208|Homo sapiens hTIM1 protein.
Length = 1208
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLN 496
+EEN P+ DS+ EEE S+ + N+N G SL+
Sbjct: 973 EEENLPEEDSEEEEEGGSEAEQVQGSLVLSNENLGQSLH 1011
>X95735-1|CAA65050.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>X94991-1|CAA64447.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
rich nuclear protein isoform protein.
Length = 1021
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 801 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 855
>U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.
Length = 1284
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 1064 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 1118
>CR457431-1|CAG33712.1| 572|Homo sapiens ZYX protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
leucine rich protein 1 protein.
Length = 1130
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 910 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 964
>BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.
Length = 1048
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 828 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 882
>BC010031-1|AAH10031.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>BC009360-1|AAH09360.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>BC008743-1|AAH08743.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein.
Length = 743
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 523 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 577
>AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HMX3
protein.
Length = 1061
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 841 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 895
>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
Length = 1130
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 FEIEEVDEENF----PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
FE EE DEE + + + + EEE ++ EE + ++ E + L ++E LE
Sbjct: 910 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 964
>AC092214-1|AAS07459.1| 572|Homo sapiens unknown protein.
Length = 572
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 502 GKLGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINADLLVEFPAKKPKPELFTVD 681
G++GEIP D P P +GD D ++G + FP + E+F
Sbjct: 58 GRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSP 117
Query: 682 KGPKWYSIANEMVTPP 729
P E PP
Sbjct: 118 PPPPEEEGGPEAPIPP 133
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+ E+ +++GE+EP S+ A A+E + + EG + + E +E
Sbjct: 1998 ETESVEALETEGEDEPESEGAEAQEAEEEAQEAEGQAQPESEVIE 2042
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+ E+ +++GE+EP S+ A A+E + + EG + + E +E
Sbjct: 1982 ETESVEALETEGEDEPESEGAEAQEAEEEAQEAEGQAQPESEVIE 2026
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+ E+ +++GE+EP S+ A A+E + + EG + + E +E
Sbjct: 1966 ETESVEALETEGEDEPESEGAEAQEAEEEAQEAEGQAQPESEVIE 2010
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+ E+ +++GE+EP S+ A A+E + + EG + + E +E
Sbjct: 1950 ETESVEALETEGEDEPESEGAEAQEAEEEAQEAEGQAQPESEVIE 1994
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+ E+ +++GE+EP S+ A A+E + + EG + + E +E
Sbjct: 1934 ETESVEALETEGEDEPESEGAEAQEAEEEAQEAEGQAQPESEVIE 1978
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+ E+ +++GE+EP S+ A A+E + + EG + + E +E
Sbjct: 1918 ETESVEALETEGEDEPESEGAEAQEAEEEAQEAEGQAQPESEVIE 1962
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,850,658
Number of Sequences: 237096
Number of extensions: 1864590
Number of successful extensions: 5471
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5243
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -