Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31038
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL032654-10|CAB63391.1|  819|Caenorhabditis elegans Hypothetical...    30   1.6  
Z82076-6|CAH10809.1|  450|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AC024817-3|AAK68524.1|  482|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z81072-8|CAE17783.1|  143|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z11505-7|CAA77581.1|  918|Caenorhabditis elegans Hypothetical pr...    28   6.5  
L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans chrom...    28   6.5  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z36753-17|CAA85342.1|  821|Caenorhabditis elegans Hypothetical p...    28   8.6  
U70848-4|AAB09108.1|  869|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U40957-2|ABC71814.1|  288|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AL132860-14|CAB60497.1|  619|Caenorhabditis elegans Hypothetical...    28   8.6  
AF240692-1|AAF61239.1|  821|Caenorhabditis elegans LIN-5 protein.      28   8.6  
AC006776-4|AAF60628.2|  354|Caenorhabditis elegans Hypothetical ...    28   8.6  

>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
            C16A3.3 protein.
          Length = 1743

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +2

Query: 359  LFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
            L + EE  EE   +++ + E+E + + AS EE      ++E D   ++E +EK ++
Sbjct: 1418 LKDAEEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEEDESDDEENIELIEKSEE 1473


>Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical
           protein R11A5.1b protein.
          Length = 896

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
           E E+ DEE+  + +++ EEE   D+    E  S     E +  +D E  EK
Sbjct: 590 EEEDEDEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDSEPEEK 640


>Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical
           protein R11A5.1a protein.
          Length = 906

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
           E E+ DEE+  + +++ EEE   D+    E  S     E +  +D E  EK
Sbjct: 600 EEEDEDEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDSEPEEK 650


>Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical
           protein F53H4.1 protein.
          Length = 957

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +2

Query: 374 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQ----NEGDSLNDMESLEK 517
           E+DEE+F +ND+    EP+S K+  +   S  ++     E D   + E LEK
Sbjct: 58  ELDEEDFCENDADVLAEPISSKSRKKSRRSDSSEFVPSEESDDDEEYEVLEK 109


>AL032654-10|CAB63391.1|  819|Caenorhabditis elegans Hypothetical
           protein Y52B11A.10 protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDME---SLEKFQQVIVTIRRL 550
           DEE+   ++ + E++P + K   E   +K  +  GD   D +   + E++ + + T  + 
Sbjct: 85  DEEDMEDSEDEEEKKPTNRKGIVEVSVNKGKRKYGDDSEDSDEDLTYEQYMEEVQTATKK 144

Query: 551 LHQVLVGTE 577
             Q   GTE
Sbjct: 145 RRQEADGTE 153


>Z82076-6|CAH10809.1|  450|Caenorhabditis elegans Hypothetical
           protein W07G1.5b protein.
          Length = 450

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMES 508
           EEV+++       + EEEP  ++   EE   +  + E +  +D ES
Sbjct: 373 EEVEDDEEDAGSDEAEEEPSDEEEEDEETEEEEEEEEEEEEDDDES 418


>Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical
           protein W07G1.5a protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMES 508
           EEV+++       + EEEP  ++   EE   +  + E +  +D ES
Sbjct: 361 EEVEDDEEDAGSDEAEEEPSDEEEEDEETEEEEEEEEEEEEDDDES 406


>AC024817-3|AAK68524.1|  482|Caenorhabditis elegans Hypothetical
           protein Y54G2A.11a protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNE 481
           +EV+EE   +NDS+ E    S+ +  ++VAS+   +E
Sbjct: 106 DEVEEEGAIENDSESENSEDSEDSDLDDVASESEDDE 142


>Z81072-8|CAE17783.1|  143|Caenorhabditis elegans Hypothetical
           protein F30A10.12 protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEV--ASKRNQNEGD 487
           E+ DE+   K D + E    S KAS + V  +SK  +NEGD
Sbjct: 81  EKKDEKEEEKKDEKKETSKKSKKASKKSVKKSSKSKKNEGD 121


>Z11505-7|CAA77581.1|  918|Caenorhabditis elegans Hypothetical
           protein F59B2.12 protein.
          Length = 918

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 434 DKASAEEVASKRNQNEGDSLNDMES 508
           DKA+AEEV SK+N N  D  + ME+
Sbjct: 311 DKATAEEVMSKKNVN-ADGTSSMEA 334


>L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans
           chromodomain proteinprotein 1 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +2

Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQ 526
           E+E+ DEE  PK   + +EEP       EE     ++ E   + D++  EK ++
Sbjct: 146 EVED-DEEPVPKKKKEVQEEP-----EEEESVEGEDEEESQEVEDLKEDEKMEE 193


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +2

Query: 401 NDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQVIVTIRRLLHQVLV 568
           + S  EE P ++K       S+  +++ DS +D+E  E+ +Q I  ++ L+  VL+
Sbjct: 318 DSSSDEESPENEKFPVGNGKSEYQEDDNDSEDDLE--ERREQFIRCVKTLMMNVLL 371


>Z36753-17|CAA85342.1|  821|Caenorhabditis elegans Hypothetical
           protein T09A5.10 protein.
          Length = 821

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 410 QGEEEPLSDKASAEEVASKRNQNEGDSLNDM--ESLEKFQQVIVTIRR 547
           + E E LS       VAS RN+ + D+   M  E L +F++ +  +R+
Sbjct: 388 KSENESLSASVEELSVASLRNKQDADNSKTMLSEELARFEETVDKLRQ 435


>U70848-4|AAB09108.1|  869|Caenorhabditis elegans Hypothetical
           protein C43G2.2 protein.
          Length = 869

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
           +EE+  +  S  EEE L   A  E    K+ Q   +   ++ES+EK
Sbjct: 86  NEESLLEESSAKEEEYLQRIAKLEADLKKKEQELAEKKEELESIEK 131


>U40957-2|ABC71814.1|  288|Caenorhabditis elegans Hypothetical
           protein R02E4.1 protein.
          Length = 288

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +2

Query: 467 RNQNEGDSLNDMESLEKFQQVIVTIRRLLHQVLVGTEMXXXXXXXKH 607
           R    GDS N M+ L +  QV V  R L    LVG  M       KH
Sbjct: 88  RKSELGDSQNPMDILLQVAQVPVNQRNLRFYYLVGQVMLRATYEKKH 134


>AL132860-14|CAB60497.1|  619|Caenorhabditis elegans Hypothetical
           protein Y56A3A.16 protein.
          Length = 619

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 368 IEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
           I EVD+ +F  + S GE E      +A +    +N+  GDS+ND+ S E+
Sbjct: 23  IIEVDQISFTSSCSSGEHEGY---VTARDTT--KNRVNGDSVNDLISFEE 67


>AF240692-1|AAF61239.1|  821|Caenorhabditis elegans LIN-5 protein.
          Length = 821

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 410 QGEEEPLSDKASAEEVASKRNQNEGDSLNDM--ESLEKFQQVIVTIRR 547
           + E E LS       VAS RN+ + D+   M  E L +F++ +  +R+
Sbjct: 388 KSENESLSASVEELSVASLRNKQDADNSKTMLSEELARFEETVDKLRQ 435


>AC006776-4|AAF60628.2|  354|Caenorhabditis elegans Hypothetical
           protein Y46H3C.6 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASK-----RNQNEGDSLND 499
           +EV EE   + + + EEEP  D+   EEV  +     RN   GD  ++
Sbjct: 75  DEVKEEPEDEKEPEDEEEPAEDEEDDEEVEERLEEEPRNVTGGDEASE 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,880,331
Number of Sequences: 27780
Number of extensions: 315042
Number of successful extensions: 1179
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)