Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31038
(779 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 32 0.49
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 32 0.49
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 31 0.65
At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 31 0.86
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 31 1.1
At3g44710.1 68416.m04809 expressed protein contains Pfam profile... 29 2.6
At5g60840.1 68418.m07632 expressed protein predicted protein, Dr... 29 3.5
At3g06830.1 68416.m00810 pectinesterase family protein contains ... 29 3.5
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 29 4.6
At4g33740.2 68417.m04791 expressed protein 29 4.6
At4g33740.1 68417.m04790 expressed protein 29 4.6
At1g66640.1 68414.m07572 expressed protein 29 4.6
At5g49180.1 68418.m06087 pectinesterase family protein contains ... 28 6.0
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 6.0
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 28 6.0
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 28 6.0
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 28 6.0
At5g47090.1 68418.m05806 expressed protein 28 8.0
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2
Query: 401 NDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE 514
+D GE EP+SDKA EEV K +E DS+ D LE
Sbjct: 278 DDDSGEFEPVSDKA-IEEVEEKFT-SESDSIADSSKLE 313
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +2
Query: 362 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQVIVTI 541
F E ++N+ + ++EP SD+ S + S++N+NE ++ DM + +FQ +++ +
Sbjct: 83 FSDEAPKKKNYENYFPKDKQEPKSDQKSEHKEGSEKNENE--NVGDM-FMNRFQNLLIPL 139
Query: 542 RRL 550
L
Sbjct: 140 LAL 142
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQ--NEGDSLNDME 505
++E+ P N G E+P S+ A A++ K+ + N DS+N+ME
Sbjct: 1505 EKESIPSNLVSGNEQPDSNTAPAKKPKKKKRKLANNFDSVNNME 1548
>At5g66540.1 68418.m08389 expressed protein ; supported by
full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
Length = 524
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 362 FEIEEVDEEN--FPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLE-KFQQV 529
F+ ++VD+E+ NDS+GE+E ++ EE + + E + D E +E KF ++
Sbjct: 119 FDSDDVDDEDKEIESNDSEGEDEE-EEEEDEEEEEEEEEEEEEEKDGDNEGIEDKFFKI 176
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 386 ENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
E+ +DS+ EEE + K A++ AS +++ DS +D E K
Sbjct: 62 ESSDDSDSESEEEEKAKKVPAKKAASSSDESSDDSSSDDEPAPK 105
>At3g44710.1 68416.m04809 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 504
Score = 29.5 bits (63), Expect = 2.6
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 56 VLQNVKKNYLKRTLTNHGKLKITDS*STVLFHHL*SPYSEHKQKN*-VQHQKLWVTK--N 226
+L+N +L +T+ + K++ + + ++FH YS K ++HQK+ +
Sbjct: 184 LLENQVPFFLLQTIFDRSKIEKSSGLNEIIFHFF--NYSLQKSNTFWLKHQKVEANHLLD 241
Query: 227 KIRSKYSRTINKEHTLQINPIMDXXXXXXXXXXXXXXXXYKFSVLFEIEEVD----EENF 394
IR+ Y + KE + N ++D + +EVD EE
Sbjct: 242 LIRNIYMPDVPKEEK-KSNHLLDCMMIRKICMPRESKQELDVMLKKGKQEVDISMLEEGI 300
Query: 395 PKNDSQGEEEPLSDKASAEEVASKR 469
PK+DS EE+ + + + V S R
Sbjct: 301 PKSDSLEEEDSTTGRHHLKMVLSAR 325
>At5g60840.1 68418.m07632 expressed protein predicted protein,
Drosophila melanogaster
Length = 207
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLND 499
E+EEV+EE + + E+E + D ASA E+ + N G L D
Sbjct: 152 EVEEVEEEVDEVGEVEEEQEEVIDSASA-EIPNGEISNGGTVLED 195
>At3g06830.1 68416.m00810 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase,PF04043 plant
invertase/pectin methylesterase inhibitor
Length = 568
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 681 IYSEKFRLWLLGGKFYKQICIDSF 610
++ E R+WL G ++Q C+DSF
Sbjct: 147 VFVEDLRVWLSGSIAFQQTCMDSF 170
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 374 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
+ D+E F ++ EE S + + +SKRN++E + +N+ + K
Sbjct: 274 DTDDETFDAYHNKSAEEEQSKEDRKRKKSSKRNKSEEEEVNNEDHKSK 321
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 365 EIEEVDEENFPKNDSQ-GEEEPLSDKASAEEVASK-RNQNEGDSLNDMESLEK 517
E+ E DEE+ K + EE+ +K +E+ + +++N GD+ D E+LE+
Sbjct: 126 EVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLEE 178
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 365 EIEEVDEENFPKNDSQ-GEEEPLSDKASAEEVASK-RNQNEGDSLNDMESLEK 517
E+ E DEE+ K + EE+ +K +E+ + +++N GD+ D E+LE+
Sbjct: 126 EVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLEE 178
>At1g66640.1 68414.m07572 expressed protein
Length = 416
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 404 DSQGEEEPLSDKASAEEVASKRNQNEGD 487
D GE+ L+ ++S+ E++ KR+ +EGD
Sbjct: 2 DEDGEKHVLTKRSSSPELSDKRSGDEGD 29
>At5g49180.1 68418.m06087 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 571
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 678 YSEKFRLWLLGGKFYKQICIDSF 610
+ E R+WL G Y+Q C+D+F
Sbjct: 154 FVEDLRVWLSGSIAYQQTCMDTF 176
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVA-SKRNQNEGDSLNDME 505
++V ++ +DS+ EEE KA EE + SK+ Q + ++ D +
Sbjct: 394 KDVGNKSSSSSDSEDEEEEKEQKAEKEEESTSKKRQEQEETATDSD 439
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 380 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQV 529
DEE + ++ EEE S K +E + + +E DS ++ + E+ Q+
Sbjct: 408 DEEEEKEQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQSQL 457
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 362 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
FE E ++E PKN + EEE +S++ EE + E + E E+
Sbjct: 39 FEDENCEQEP-PKNLHEPEEEKISEEVDDEEPMQSQGMEENPEEEEKEGEEE 89
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEK 517
++EE EEN D G EE + AS E +++++ E D + K
Sbjct: 155 QLEESTEEN-KSEDGNGNEEKAEENASETEESTEKSSKEVFPAGDQAEITK 204
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 371 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDME 505
E V +N +N S E P + ++ + KR QN+ +LN+ +
Sbjct: 399 EPVKHQNGLENSSTQHEMPEEENSNEKSRKRKREQNQNSNLNETD 443
>At5g47090.1 68418.m05806 expressed protein
Length = 310
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 365 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESLEKFQQVI 532
E + V E +++ + EEE ++ +E A + SLN E EK V+
Sbjct: 195 ESDWVGNEKMEESEEEEEEESEEEEEEEDEEAKNPTEASSSSLNGKEQKEKATTVL 250
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,632,251
Number of Sequences: 28952
Number of extensions: 278741
Number of successful extensions: 1092
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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