Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31030
         (351 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    71   7e-12
UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1; ...    34   0.58 
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   3.1  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   3.1  
UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin be...    31   4.1  
UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    31   4.1  
UniRef50_Q8YYT4 Cluster: Hydrogenase chain U; n=22; Bacteria|Rep...    31   5.4  
UniRef50_A3PZT1 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|...    31   7.2  
UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_O62471 Cluster: Putative uncharacterized protein qui-1;...    31   7.2  
UniRef50_A3WU22 Cluster: Prophage LambdaMc01, DNA methyltransfer...    30   9.5  
UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-P...    30   9.5  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = +2

Query: 47  IYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXXYYGNLVAGSIVSQLTAAAMVAPTP 220
           IYGTGGLLTP+VAP+L                  YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 215

 Score = 34.3 bits (75), Expect = 0.58
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = +1

Query: 1   GASSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNS-GRKHSRCCTSILRKFSGR-Q 174
           G  S   G  GR+        +    +G R+  + SGN  G+   R C     +  GR Q
Sbjct: 45  GEQSLAPGNSGRQITGKQKRSNNGQEAGQRSEPRHSGNERGKAEQRWCVDESNRRGGRSQ 104

Query: 175 HCVTVDCCCHGSPH 216
            CV     CHGSP+
Sbjct: 105 LCVAAAMRCHGSPN 118


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
          genome shotgun sequence; n=1; Tetraodon
          nigroviridis|Rep: Chromosome undetermined SCAF3766,
          whole genome shotgun sequence - Tetraodon nigroviridis
          (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 92 AREPLMESTDPQCHILQHRRPRLPLMQLE 6
          A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5  AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 10   SCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 114
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin beta
            2-like chain; n=1; Ornithorhynchus anatinus|Rep:
            PREDICTED: similar to laminin beta 2-like chain -
            Ornithorhynchus anatinus
          Length = 1850

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -3

Query: 208  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR 107
            YHGSS Q    A GH   +VCLC+ G A  R  R
Sbjct: 943  YHGSSCQ----ADGHTGQIVCLCAPGYAGSRCDR 972


>UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 82

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 115 SGRKHSRCCTSILRKFSGRQHCVTVDCCCHGSP 213
           SG     C       F G  HCV+  CCC+G P
Sbjct: 36  SGTYQIACVECPCDGFDGPCHCVSDGCCCNGGP 68


>UniRef50_Q8YYT4 Cluster: Hydrogenase chain U; n=22; Bacteria|Rep:
           Hydrogenase chain U - Anabaena sp. (strain PCC 7120)
          Length = 238

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = -2

Query: 338 FFTSHRQIY*KFKCILIPNKTEKVRSWSMSRTGDV*HHLMAWGLPWQQQSTVTQCCRPLN 159
           F   H +     +CI + ++ E   +W M+  G   H +     PW    T T C + +N
Sbjct: 141 FGVDHNRCVLCTRCIRVCDEIEGAHTWDMAGRGTNSHVITDLSQPWGTSDTCTSCGKCVN 200


>UniRef50_A3PZT1 Cluster: Putative uncharacterized protein; n=1;
           Mycobacterium sp. JLS|Rep: Putative uncharacterized
           protein - Mycobacterium sp. (strain JLS)
          Length = 82

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 133 RCCTSILRKFSGRQHCVTVDCCCHGSPHAMR 225
           R   S+ R+  GR HCV +DC    S  A R
Sbjct: 27  RSSVSVQRRRGGRDHCVAIDCFAGRSVQAKR 57


>UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 495

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 31  GRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQH 177
           G RC  IW W ++     S A+ +L   SG  H R   S L++   R+H
Sbjct: 334 GSRCSRIWVWRNI-----SAAQLRLGRXSGLPHRRKKXSALQQILHREH 377


>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
           Sophophora|Rep: CG17608-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 271

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -2

Query: 215 WGLPWQQQSTVTQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 39
           WG  +  +S  T     L   +  +Q+R C L LFP     +++ L+       HI LQ 
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195

Query: 38  RRPRLPLM 15
           + P  P++
Sbjct: 196 KSPVQPVV 203


>UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 116

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = +1

Query: 1   GASSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQHC 180
           G+ SC++G    RC      G    ISGS +    +      + RC TS LR  +G   C
Sbjct: 14  GSHSCVTGNH--RC----ETGDHSCISGSHSCVTGNHICETGNHRCVTSNLRCETGSHSC 67

Query: 181 VTVDCCCHGSPHA 219
           VT +  C    H+
Sbjct: 68  VTSNHRCETGDHS 80


>UniRef50_O62471 Cluster: Putative uncharacterized protein qui-1; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein
            qui-1 - Caenorhabditis elegans
          Length = 1592

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 208  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR*AETEHGSH*WSQQTPS 56
            YH +S QL     GH  +V CLCSS  +S   S   +       +SQ TP+
Sbjct: 896  YHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWVFSQSTPT 946


>UniRef50_A3WU22 Cluster: Prophage LambdaMc01, DNA
           methyltransferase; n=4; Alphaproteobacteria|Rep:
           Prophage LambdaMc01, DNA methyltransferase - Nitrobacter
           sp. Nb-311A
          Length = 451

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 22  GKRGRRCCNIWHWGSVDSISGSR 90
           GK GR   N+W + SV+S+ GSR
Sbjct: 346 GKYGRNRTNVWDYASVNSMRGSR 368


>UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 2139

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 103 LSGNSGRKHSRCCTSILRKFSGRQH 177
           LSG+S   HSR  T++LRK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,301,687
Number of Sequences: 1657284
Number of extensions: 6044786
Number of successful extensions: 13571
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13516
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)