Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31030
         (351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   2.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   6.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   8.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   8.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 191 STVTQCCRPLNFRSMLVQQRLCFLP 117
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 351 FFFFFFYIASTNLLKI 304
           +F+F FYI S  LL +
Sbjct: 55  YFYFSFYITSYTLLSV 70


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 351 FFFFFFYIASTNLLKI 304
           +F+F FYI S  LL +
Sbjct: 55  YFYFSFYITSYTLLSV 70


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 331 HRIDKFIKNLNA 296
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 139 SSGCASCRYSR*AETEH 89
           S GC +C Y    E+ H
Sbjct: 33  SQGCKACGYHSPLESNH 49


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 245 FSTCSRIGPFLFYLELKCI*IFNK 316
           F +C+       YLE+KC  I+N+
Sbjct: 771 FDSCTVCTCDAKYLEIKCKRIYNE 794


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 313 IKNLNAF*FQIKQKRSDPGAC 251
           I+N+N F  Q+  ++ +  AC
Sbjct: 327 IRNINLFSLQLAHQKLEFSAC 347


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 313 IKNLNAF*FQIKQKRSDPGAC 251
           I+N+N F  Q+  ++ +  AC
Sbjct: 152 IRNINLFSLQLAHQKLEFSAC 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,846
Number of Sequences: 336
Number of extensions: 1647
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)