Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31025
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0593 + 20874459-20874575,20875258-20875427,20875597-208756... 95 6e-20
12_01_0933 - 9263023-9263146,9263224-9263416,9263495-9263634,926... 91 1e-18
09_01_0138 - 2070357-2070722 33 0.15
06_03_0218 + 18219956-18220555 32 0.47
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55... 31 0.82
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 31 0.82
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 31 1.1
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 31 1.1
03_01_0169 + 1385813-1388359 30 1.4
01_06_1346 - 36478844-36479266,36479369-36479728,36479820-364801... 30 1.4
12_02_0634 + 21416205-21416954 30 1.9
10_07_0034 - 12163944-12164537 30 1.9
07_03_0675 + 20611460-20612053 30 1.9
04_01_0209 + 2603411-2603538,2603580-2604096 30 1.9
09_01_0164 + 2424158-2424164,2424165-2424536,2428623-2428807,242... 29 2.5
12_01_0981 + 9931542-9931606,9931779-9933105 29 3.3
07_03_0676 + 20618677-20618840,20618938-20619502 29 3.3
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052... 29 4.4
07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049 28 5.8
06_03_0220 + 18276641-18276915,18278445-18278676 28 5.8
04_03_0145 - 11799689-11800108 28 5.8
03_06_0492 - 34313286-34313405,34313592-34313715,34313925-343139... 28 5.8
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038 28 5.8
12_02_0655 + 21588662-21589051 28 7.7
10_08_0098 + 14779883-14780037,14780104-14781034 28 7.7
09_02_0181 - 5425833-5426527,5426667-5429397 28 7.7
07_03_1637 + 28293033-28293779,28294652-28295233,28295650-282958... 28 7.7
05_03_0202 - 9874205-9874762 28 7.7
04_03_0153 + 11919769-11919880,11920190-11920488,11921909-119220... 28 7.7
03_05_0955 + 29168771-29170507 28 7.7
02_04_0242 + 21210062-21210541 28 7.7
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 28 7.7
>12_02_0593 +
20874459-20874575,20875258-20875427,20875597-20875672,
20875764-20875894,20876570-20876692,20876780-20876893,
20877163-20877239,20877405-20877472,20877740-20877861,
20878041-20878180,20878411-20878603,20878692-20878827
Length = 488
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = +1
Query: 13 ND-KKQLILDGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTKK 189
ND ++ + DG V+VVY+R+GY P YP+ EW ARL +E+S+A+KCPSI Y L GTKK
Sbjct: 261 NDYQENFVRDGKTVSVVYFRAGYTPNDYPSEAEWAARLLLEQSSAVKCPSISYHLVGTKK 320
Query: 190 VQQALAGPGVLEKFM 234
+QQ LA P VLE+F+
Sbjct: 321 IQQELARPNVLERFL 335
Score = 77.8 bits (183), Expect = 7e-15
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 240 RDEHLRVRDIFTGLYSLDFDESGERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALT 419
++E ++R F GL+SLD +E V+ A+ E FVLKPQREGGGNN+YG +VR+ L
Sbjct: 338 KEEITKIRKCFAGLWSLDDEE----IVKSAIQKPELFVLKPQREGGGNNIYGIDVRETLI 393
Query: 420 RMRH--SRERAAYILMERILPPLVSGYMIRPG 509
R++ AAYILM+RI P ++R G
Sbjct: 394 RLQKEGGDALAAYILMQRIFPKASLSNLVRGG 425
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +2
Query: 539 VSELGIFGVIIGTKEKIYCNRQVGHMLRTKLADANEGGVAAG 664
+SELGI+G + +K+ N Q G+++RTK++ ++EGGVAAG
Sbjct: 433 ISELGIYGAYLRNNDKVVMNEQSGYLMRTKVSSSDEGGVAAG 474
>12_01_0933 -
9263023-9263146,9263224-9263416,9263495-9263634,
9263760-9263881,9263970-9264039,9264463-9264498,
9264567-9264692,9265294-9265424,9265549-9265645,
9265858-9266027,9267817-9267874,9268758-9269074
Length = 527
Score = 90.6 bits (215), Expect = 1e-18
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +1
Query: 37 DGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGPG 216
DG PVAVVY+R+GY P YP+ EW ARL +E S+AIKCPSI + L GTKK+QQ LA
Sbjct: 313 DGLPVAVVYFRAGYTPNDYPSEAEWRARLLIECSSAIKCPSIAHHLVGTKKIQQELAKEN 372
Query: 217 VLEKFM 234
VLE+F+
Sbjct: 373 VLERFL 378
Score = 81.0 bits (191), Expect = 8e-16
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 RVRDIFTGLYSLDFDESGERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRH- 431
+VR F GL+SL+ D V A+ E FVLKPQREGGGNN+YG +R+ L ++
Sbjct: 386 KVRKCFAGLWSLENDS----IVMSAIESPELFVLKPQREGGGNNIYGDNLRETLISLKKD 441
Query: 432 -SRERAAYILMERILPPLVSGYMIRPG 509
S E AAYILM+RI PP Y++R G
Sbjct: 442 GSNELAAYILMQRIFPPASLCYLVRDG 468
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 539 VSELGIFGVIIGTKEKIYCNRQVGHMLRTKLADANEGGVAAG 664
VSE GIFG + K+++ N Q G+++RTK A NEGGV AG
Sbjct: 476 VSEFGIFGAYLRNKDRVIINDQCGYLMRTKAASLNEGGVVAG 517
>09_01_0138 - 2070357-2070722
Length = 121
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 111 GREITRRKIHGHKMSIDPLPTGGNEEGPTSPGRSRGAGEV 230
G E RR HKMS + + G E PGR G GEV
Sbjct: 5 GTEEWRRNTDTHKMSAEEVRAAGVEASMRPPGRGHGPGEV 44
>06_03_0218 + 18219956-18220555
Length = 199
Score = 31.9 bits (69), Expect = 0.47
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +2
Query: 236 APGRAPPSPGYIHGTVLAGLRRERRESSGDGTGRCREIRIEASKGRWRE*CVRFGSEG-- 409
+P +P + G G +A RE+ + DG RE R+EA+ RE R GS G
Sbjct: 74 SPVLSPRNGGLTEGEEVAARPREKT-ARPDGARARRERRLEAAGAEKREGRRRGGSSGGL 132
Query: 410 RVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGA 511
R A++ G G G D A+G R + A A
Sbjct: 133 RGKRRASRGGGGGGDAGGGD-GAAGRRTVEAAQA 165
>06_01_0065 +
549972-550770,551577-552190,552392-552544,552769-552885,
552972-553076,553269-553334,553430-553494,553577-553778,
554026-554169,554212-554340
Length = 797
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 401 SEGRVDSHATQPGAGRVHT---DGEDIAASGIRVHDKAGAPVPPPLVDLVSEL 550
S+ DSHA+ P R D A+S + D A P PPP+ D+ +
Sbjct: 75 SDSADDSHASTPSQRRRRRPRHDAHATASSSTSLSDDAAHPPPPPIYDVTKSM 127
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 31.1 bits (67), Expect = 0.82
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 80 SRHSIPPQGNGTRDYASKDPRP*NVHRSTTNWRERRRSNKPWPVPGCWRSSWAPGRAPPS 259
SR S PP+G G + S P +H T R+ R + P ++ S +PP
Sbjct: 108 SRSSRPPRGRGQMEVDSPQPSR-ALHTPPTGQRQVTR-HPPPAARTMFQESPVASVSPPQ 165
Query: 260 PGYIHGTVLAGLRR-ERRESSGDGTGRCREIRIEA-SKGRWRE*CVR-FGSEGRVDSHAT 430
+ V A LR ERR ++ R+++++ R + +R + EGR + T
Sbjct: 166 QQQVAVPVSAALREFERRRAAAAAEAALRQLQLQVWEAARQQSQQLRLYTVEGRAAGYGT 225
Query: 431 Q 433
+
Sbjct: 226 K 226
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 595 AVDLLFRTNNDPKYSEFRHEVDQRRWDRRPGLIMYPDTRGGNILSISMYAARSRL-CRMR 419
A L R+N+ P + E +RRW RRP P+ LS+ ARS L CR
Sbjct: 32 ATSFLPRSNHRPSLAR-PQEPARRRWSRRPTSPSAPNLLRAAPLSLVSATARSLLACRRE 90
Query: 418 VNASLTSEPYTLFPPP 371
S+ P PPP
Sbjct: 91 GIGSVRPPP----PPP 102
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 296 RRERRESSGDGTG--RCREIRIEASKGRWRE*CVRFGSEGRVDSHATQPGAGRVHTDGED 469
+R SSG G+G CRE+R A+ R VR + RV++ A + A E+
Sbjct: 20 KRGEGGSSGSGSGCTSCREVRRRAAAVR-----VRAAAPRRVEAVAMESAAET--EKKEE 72
Query: 470 IAASGIRVHDKAGAPVP 520
+AA+G V D A VP
Sbjct: 73 VAAAGGGVEDMATEEVP 89
>03_01_0169 + 1385813-1388359
Length = 848
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -2
Query: 278 SREYIPDSEVLVPEPMNFSS-----TPGPARACWTFFVP 177
+RE PDS MN +S TPGP WTF +P
Sbjct: 264 TREVAPDSVYKTQRAMNMASQQLFLTPGPFNLTWTFALP 302
>01_06_1346 -
36478844-36479266,36479369-36479728,36479820-36480110,
36480193-36480267,36482292-36482446,36482549-36482665,
36482757-36482976
Length = 546
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1
Query: 94 PTAREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGPGVLEKFMGSGTSTSESGIYS 273
PT + + R+E T+ ++ L +K+ L +L+ F E GI +
Sbjct: 152 PTWQSFPDGTRLEVMTSRPRSDLYINLPALRKLDHMLIE--ILDSFRDPEFWYVEQGICA 209
Query: 274 RDCTRWTSTRAA--REQWRWHWPMPR 345
DC S RAA R +W P+PR
Sbjct: 210 PDCDGSASFRAAFHRRDEKWWLPVPR 235
>12_02_0634 + 21416205-21416954
Length = 249
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2
Query: 182 RRRSNKPWPVPGCWRSSWAPGRAPPSPGYIHGTVLAGLRRERRESSGDGTGRCR 343
RR S + +PG +SW+ GR + G G RR S GD TGR R
Sbjct: 87 RRCSGEEEVIPGMRAASWSRGRWWRRRPALRGRGRGG---RRRRSGGDATGRRR 137
>10_07_0034 - 12163944-12164537
Length = 197
Score = 29.9 bits (64), Expect = 1.9
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Frame = +2
Query: 158 RSTTNWRERRRSNKPWPVPGCWRSSWA-PGRAPPSPGYIHGTVLAGLRRERRESSGDGTG 334
R T WR W C+ A P +P + G G +A RE+ + DG
Sbjct: 48 RETRQWRPEVEQ---WRQRHCFAGEDASPVLSPRNGGLTEGEEVAARPREKT-ARPDGAP 103
Query: 335 RCREIRIEASKGRWRE*CVRFGSEG--RVDSHATQPGAGRVHTDGEDIAASGIRVHDKAG 508
RE R+EA+ RE R + G R A + G G G D A+G R + A
Sbjct: 104 ARRERRLEAAGAEEREGRRRERASGGHRAKRRAGRGGGGGGDAGGGD-GAAGRRTVEAAQ 162
Query: 509 A 511
A
Sbjct: 163 A 163
>07_03_0675 + 20611460-20612053
Length = 197
Score = 29.9 bits (64), Expect = 1.9
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Frame = +2
Query: 158 RSTTNWRERRRSNKPWPVPGCWRSSWA-PGRAPPSPGYIHGTVLAGLRRERRESSGDGTG 334
R T WR W C+ A P +P + G G +A RE+ + DG
Sbjct: 48 RETRQWRPEVEQ---WRQRHCFAGENASPVLSPRNGGLTEGEEVAARPREKT-ARPDGAP 103
Query: 335 RCREIRIEASKGRWRE*CVRFGSEG--RVDSHATQPGAGRVHTDGEDIAASGIRVHDKAG 508
RE R+EA+ RE R + G R A + G G G D A+G R + A
Sbjct: 104 ARRERRLEAAGAEEREGRRRERASGGHRAKRRAGRGGGGGGDAGGGD-GAAGRRTVEAAQ 162
Query: 509 A 511
A
Sbjct: 163 A 163
>04_01_0209 + 2603411-2603538,2603580-2604096
Length = 214
Score = 29.9 bits (64), Expect = 1.9
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Frame = +2
Query: 158 RSTTNWRERRRSNKPWPVPGCWRSSWA-PGRAPPSPGYIHGTVLAGLRRERRESSGDGTG 334
R T WR W C+ A P +P + G G +A RE+ + DG
Sbjct: 69 RETRQWRPEVEQ---WRQRHCFAGEDASPVLSPRNGGLTEGEEVAARPREKT-ARPDGAP 124
Query: 335 RCREIRIEASKGRWRE*CVRFGSEG--RVDSHATQPGAGRVHTDGEDIAASGIRVHDKAG 508
RE R+EA+ RE R + G R A + G G G D A+G R + A
Sbjct: 125 ARRERRLEAAGAEEREGRRRERASGGHRAKRRAGRGGGGGGDAGGGD-GATGRRTVEAAQ 183
Query: 509 A 511
A
Sbjct: 184 A 184
>09_01_0164 +
2424158-2424164,2424165-2424536,2428623-2428807,
2429045-2429200
Length = 239
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 37 DGHPVAVVYYRSGYEPAQYPTAREWDARLRVERS 138
DGHP +VY SGY AQ RLR R+
Sbjct: 84 DGHPQDMVYDSSGYIDAQATRQARLRCRLRTNRT 117
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -2
Query: 563 PQIFRVPTRGRPAAVGQAPRPYHVP----*YQRRQYPLHQYVRGPLPAVSHASQRVPHF 399
P I PT G P PYH P +Q +P H + P P H R PH+
Sbjct: 123 PPISSTPTHFWEGGHGAHPEPYHQPYNPYYHQEPFHPPHHHQYNPEPHHPHYEHR-PHY 180
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 29.1 bits (62), Expect = 3.3
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Frame = +2
Query: 158 RSTTNWRERRRSNKPWPVPGCWRSSWA-PGRAPPSPGYIHGTVLAGLRRERRESSGDGTG 334
R T WR W C+ A P +P + G G +A RE+ + DG
Sbjct: 111 RETRQWRPEVEQ---WRQRHCFAGEDASPVLSPRNGGLTEGEEVAARPREKT-ARPDGAP 166
Query: 335 RCREIRIEASKGRWRE*CVRFGSEG--RVDSHATQPGAGRVHTDGEDIAA 478
RE R+EA+ RE R + G R A + G G G D AA
Sbjct: 167 ARRERRLEAAGAEEREGRRRERASGGHRAKRRAGRGGGGGGDAGGGDGAA 216
>02_03_0235 -
16702768-16702956,16703956-16704492,16705084-16705233,
16705310-16705625,16707005-16707286,16707895-16707971,
16708121-16708186,16708700-16709246,16709435-16709565,
16709642-16709746,16709859-16710039,16710123-16710185,
16711000-16711109,16711576-16711638,16711859-16712191
Length = 1049
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 203 WPVPGCWRSSW-APGRAPPSPGYIHGTVLAGLRRERRESSGDGTGRCREIRIE 358
WP P W SW P RAP PG R E CR +R++
Sbjct: 39 WPWPWPWSWSWPPPPRAPAWPGDRRRQRERAFREEFERRRRQLRELCRAVRVD 91
>07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049
Length = 444
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 235 GSGTST---SESGIYSRDCTRWTSTRAAREQWRWHWPMPRD 348
GSG++T S + + S RW+ RA R R WP RD
Sbjct: 69 GSGSATTPRSPAQLGSSQLHRWSRARAHRSGRRLEWPTIRD 109
>06_03_0220 + 18276641-18276915,18278445-18278676
Length = 168
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 185 RRSNKPWPVPGCWRSSWAPGRAPPSPGY---IHGTVLAGLRRERRESS 319
RR++ PW P + P R PPS G AG +ERRE S
Sbjct: 46 RRAHTPWCPPLSVADARMPPRPPPSEAVQPAAAGRARAGRAQERRERS 93
>04_03_0145 - 11799689-11800108
Length = 139
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 486 IPEAAISSPSVCTRPAPGC 430
+P A +SPS CT APGC
Sbjct: 1 MPRGAAASPSWCTPMAPGC 19
>03_06_0492 -
34313286-34313405,34313592-34313715,34313925-34313986,
34314298-34314395,34314478-34314514,34314602-34314873,
34315025-34315028
Length = 238
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +3
Query: 294 FDESGERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRHSRERAAYILMERIL 473
+++ ER+ + + R Q+ GGGN+VY +++RD + + A I++ +
Sbjct: 6 YNKLKERSDQFVVRGLVRTEESKQKIGGGNDVYIADIRDRDHLVPAVQGVDALIILTSAV 65
Query: 474 PPLVSGY 494
P + G+
Sbjct: 66 PKMKPGF 72
>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
Length = 237
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 489 LIPEAAISSPSVCTRPAPGCVACESTRPSLPNRTHYSR 376
LIP AAI+ P PGC C P+ P R + R
Sbjct: 45 LIPLAAIALPRRAPPTVPGC--CTQVVPAQPQRRRFPR 80
>12_02_0655 + 21588662-21589051
Length = 129
Score = 27.9 bits (59), Expect = 7.7
Identities = 32/95 (33%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +2
Query: 212 PGCWRSSWAPGRAPPSPGYIHGTVLAGLRRERRESSGDGTGRCREIRIEASKGRWR--E* 385
P W W R + G V G RRE R G G R R R + WR
Sbjct: 34 PRMWIGDWREERGSVAVG-----VAPGRRRESRRRPGSGEARRRRQR-PGVEPAWRGGGG 87
Query: 386 CVRFGSEGRVDSHATQPGAGRVHTDGEDIAASGIR 490
VR S GR D+ A G G V D E++ G R
Sbjct: 88 GVREWS-GRGDATAAVSGRGGV--DLEEVGGEGRR 119
>10_08_0098 + 14779883-14780037,14780104-14781034
Length = 361
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 550 RNIWGHYWYEREDLLQSSGR 609
+N WG+Y + ++D L+SSGR
Sbjct: 115 QNSWGYYAFWKKDELESSGR 134
>09_02_0181 - 5425833-5426527,5426667-5429397
Length = 1141
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 227 SSWAPGRAPPSPGYIHGTVLAGLRRERRESSGDGTGRCREIRIEASKGRW 376
S+W G P G T +G R ERR+ G G G R + A + W
Sbjct: 999 STWGGGSGAPMAGSGFPTHGSGRRGERRDGGGVG-GERRVRALPARRAAW 1047
>07_03_1637 +
28293033-28293779,28294652-28295233,28295650-28295863,
28295894-28295911,28295983-28296118,28296203-28296281
Length = 591
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 168 PTGGNEEGPTSPGRSRGAGEVHGLRDEHLRVRDIFTGLYSLDFDESG 308
P G +P R +G +VH L ++H+ VR ++ L ++ G
Sbjct: 177 PDGNARFVAAAPQRMKGMVQVHRLAEDHVYVRAHYSSLAAIALSADG 223
>05_03_0202 - 9874205-9874762
Length = 185
Score = 27.9 bits (59), Expect = 7.7
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Frame = +2
Query: 158 RSTTNWRERRRSNKPWPVPGCWRSSWAPGRAPP-SPGYIHGTVLAGLRRERRESSGDGTG 334
R T WR W C+ A PP + G G +A RE+ + DG
Sbjct: 40 RETRQWRPEVEQ---WRQRHCFAGEDASPVLPPRNGGLTEGEEVAARPREKT-ARPDGAP 95
Query: 335 RCREIRIEASKGRWRE*CVRFGSEG--RVDSHATQPGAGRVHTDGEDIAASGIRVHDKAG 508
RE R+EA+ RE + + G R A + G G G D A+G R + A
Sbjct: 96 ARRERRLEAAGAEEREGRRQERASGGHRAKRRAGRGGGGGGDAGGGD-GAAGRRTVEAAQ 154
Query: 509 A 511
A
Sbjct: 155 A 155
>04_03_0153 +
11919769-11919880,11920190-11920488,11921909-11922024,
11922113-11922248,11922959-11923006,11924130-11924228,
11924317-11924385,11924465-11924599,11924687-11924755,
11925221-11925276,11925465-11925624,11926534-11926698,
11927484-11927568,11927646-11927849,11928396-11928487,
11928571-11928613,11930727-11930884,11931520-11931630,
11931947-11932012,11933716-11933784,11934181-11934255,
11934330-11934506,11934598-11934683,11936259-11936313,
11936901-11936939,11938105-11938230,11938319-11938432,
11939208-11939265,11939485-11939623,11939698-11939783,
11939842-11940041
Length = 1148
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +2
Query: 365 KGRWRE*CVRFGSEGRVDSHATQPGAGRV-HTDGEDIAASGIRVHDKAGAPVPPPLV--- 532
+GRWR +G D GAG + DI S V K+G P+PP +
Sbjct: 17 RGRWR-----YGCRADSDLDGADNGAGSLLFLPKIDIPFSAYLVLHKSGIPLPPNFLHRR 71
Query: 533 DLVSELGIFGV 565
DLV GI V
Sbjct: 72 DLVRARGILPV 82
>03_05_0955 + 29168771-29170507
Length = 578
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 507 PALSCTLIPEAAISSPSVCTRPAPGCVACESTRPSLPNRTHYSR 376
P + L+P+ A ++P C+ P+P + P L + SR
Sbjct: 173 PEAAPALLPQPAAATPVACSSPSPSSADASCSAPILQSLLSCSR 216
>02_04_0242 + 21210062-21210541
Length = 159
Score = 27.9 bits (59), Expect = 7.7
Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Frame = +2
Query: 230 SWAPGRAPPSPGYIHGTVLAGLRRERRESSGDGTGRCREIRIEASKGRWRE*C----VRF 397
+W G P P + G R E GDG G R R +G +
Sbjct: 2 AWGRGGGSPPPSL--PDLAGGGRGEAGGGGGDGAGPRRRRRARRGRGGGSPPSSLPDLAG 59
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G +GR + A G G DG+D+ A A AP+P P
Sbjct: 60 GGKGRPPTAAMARGGG---GDGDDVRAGA-----AAAAPLPSP 94
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 149 NVHRSTTNWRERRRSNKPWPVPGCWRSSWAPGRAPPSPGYIHG----TVLAGLRRERRES 316
++ RS ++ R R RS+ P P R A + S Y H + RR+R+ES
Sbjct: 370 HLERSQSSDRRRPRSSDPRYTPSRTRDEDAH-KQHSSRDYSHSKHERSSHTEHRRDRKES 428
Query: 317 SGDGTGRCREIRIEASK 367
S R REI+ + SK
Sbjct: 429 SASDKHRHREIKDKTSK 445
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,382,746
Number of Sequences: 37544
Number of extensions: 618129
Number of successful extensions: 2411
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2404
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -