Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31025
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28474| Best HMM Match : GSH_synthase (HMM E-Value=3.20001e-40) 101 5e-22
SB_52335| Best HMM Match : FF (HMM E-Value=9.2) 33 0.21
SB_24167| Best HMM Match : FF (HMM E-Value=9.2) 33 0.21
SB_18429| Best HMM Match : FF (HMM E-Value=9.2) 33 0.21
SB_21814| Best HMM Match : DUF1323 (HMM E-Value=8) 33 0.28
SB_29437| Best HMM Match : POPLD (HMM E-Value=3.9) 32 0.48
SB_43036| Best HMM Match : Chorion_3 (HMM E-Value=1.6) 31 0.84
SB_8784| Best HMM Match : Chorion_3 (HMM E-Value=0.37) 31 0.84
SB_7506| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0) 30 1.9
SB_12815| Best HMM Match : POPLD (HMM E-Value=0.88) 30 1.9
SB_2657| Best HMM Match : POPLD (HMM E-Value=0.88) 30 1.9
SB_43173| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_30424| Best HMM Match : Chorion_3 (HMM E-Value=5.6) 29 2.6
SB_3238| Best HMM Match : Chorion_3 (HMM E-Value=1.6) 29 2.6
SB_59337| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 29 3.4
SB_24603| Best HMM Match : GatB_Yqey (HMM E-Value=0.7) 29 3.4
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48) 29 3.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24) 29 4.5
SB_44108| Best HMM Match : Chorion_3 (HMM E-Value=0.81) 29 4.5
SB_26213| Best HMM Match : CITED (HMM E-Value=2.5) 29 4.5
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 29 4.5
SB_58063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_58850| Best HMM Match : Pro_Al_protease (HMM E-Value=3.9) 28 5.9
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_43859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_43172| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_34695| Best HMM Match : CXC (HMM E-Value=4.7) 28 5.9
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_57825| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 7.9
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_17222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_28474| Best HMM Match : GSH_synthase (HMM E-Value=3.20001e-40)
Length = 372
Score = 101 bits (242), Expect = 5e-22
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +1
Query: 7 ELNDKKQLILDGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTK 186
EL + K+LIL+GH VAVVY+R+GY P+ Y + W +RL +ERS AIKCP++ QL GTK
Sbjct: 276 ELREDKKLILEGHEVAVVYFRAGYSPSCYNSEDAWTSRLMIERSKAIKCPTMATQLVGTK 335
Query: 187 KVQQALAGPGVLEKFM 234
KVQQ LA PGVLE+F+
Sbjct: 336 KVQQVLAEPGVLERFV 351
>SB_52335| Best HMM Match : FF (HMM E-Value=9.2)
Length = 236
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 308 RESSGDGTGRCREIRIEASKGRWRE*CVRF-GSEGRVDSHATQPGAGRVHTDGEDIAASG 484
+E+ G+ T C R A R + R+ G RV H T PG RV + A++
Sbjct: 148 QEAKGE-TESCGRTRSVADAERSGDKHGRWAGVHPRVQ-HVTDPGIDRVPSRRRSKASAP 205
Query: 485 IRVHDKAGAPVPPP 526
+VH + GAP P P
Sbjct: 206 AKVHAEGGAPAPSP 219
>SB_24167| Best HMM Match : FF (HMM E-Value=9.2)
Length = 482
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 308 RESSGDGTGRCREIRIEASKGRWRE*CVRF-GSEGRVDSHATQPGAGRVHTDGEDIAASG 484
+E+ G+ T C R A R + R+ G RV H T PG RV + A++
Sbjct: 394 QEAKGE-TESCGRTRSVADAERSGDKHGRWAGVHPRVQ-HVTDPGIDRVPSRRRSKASAP 451
Query: 485 IRVHDKAGAPVPPP 526
+VH + GAP P P
Sbjct: 452 AKVHAEGGAPAPSP 465
>SB_18429| Best HMM Match : FF (HMM E-Value=9.2)
Length = 456
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 308 RESSGDGTGRCREIRIEASKGRWRE*CVRF-GSEGRVDSHATQPGAGRVHTDGEDIAASG 484
+E+ G+ T C R A R + R+ G RV H T PG RV + A++
Sbjct: 368 QEAKGE-TESCGRTRSVADAERSGDKHGRWAGVHPRVQ-HVTDPGIDRVPSRRRSKASAP 425
Query: 485 IRVHDKAGAPVPPP 526
+VH + GAP P P
Sbjct: 426 AKVHAEGGAPAPSP 439
>SB_21814| Best HMM Match : DUF1323 (HMM E-Value=8)
Length = 359
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 75 VRAGTVSHRKGMGREITRRKIHGHKMSIDPLPTGGNEEGPTSPGRSRGAGEVHGL 239
VR G + KG R+ R K+HGH + +P P GP PGR H L
Sbjct: 24 VRKGLLRVAKGRSRKHVRPKVHGHLLQGEP-PKA--PAGPEHPGRGHPRNIKHRL 75
>SB_29437| Best HMM Match : POPLD (HMM E-Value=3.9)
Length = 356
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPPLVDLVSELGIFG 562
G RV HAT PG RV + + ++ +VH + AP P P V + G
Sbjct: 276 GGHPRVQ-HATDPGIDRVPSRRQSKDSAPAKVHAEGAAPAPSPRTHAVHSMTAAG 329
>SB_43036| Best HMM Match : Chorion_3 (HMM E-Value=1.6)
Length = 621
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + + ++ +VH + AP P P
Sbjct: 545 GGHPRVQ-HVTDPGIDRVPSRRQSMDSAPAKVHAEGAAPAPSP 586
>SB_8784| Best HMM Match : Chorion_3 (HMM E-Value=0.37)
Length = 534
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + A++ +VH + AP P P
Sbjct: 448 GGHPRVQ-HVTDPGIDRVPSRRRSKASAPAKVHAEGAAPAPSP 489
>SB_7506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 559 KYSEFRHEVDQRRWDRRPGLIMYPDTRGGNILSISMYAARSRLCRMR 419
++++F E Q +WD PG DTRG + + + SR+ R
Sbjct: 171 EFAKFEKERSQAKWDTDPGASQISDTRGWLLYRFMIGPSASRISDTR 217
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 158 RSTTNWRERRRSNKPWPVPGCWRSSWA-PGR 247
R T W R N PWP P + + W+ P R
Sbjct: 649 RYNTPWSTPSRYNTPWPTPSRYNTPWSTPSR 679
>SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 621
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 151 ILWPWIFRRVISRPIPLRWDTVPARTLICSKRLLRDD 41
++ PW+ R +S+PIP R D V L + RL D
Sbjct: 548 LIMPWMSRVPLSQPIPKRSDRVSCGALSSTPRLFTAD 584
>SB_12815| Best HMM Match : POPLD (HMM E-Value=0.88)
Length = 634
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV HAT PG RV + + ++ +VH + P P P
Sbjct: 554 GEHPRVQ-HATDPGIDRVPSRRQSKDSAPAKVHPEGAVPAPSP 595
>SB_2657| Best HMM Match : POPLD (HMM E-Value=0.88)
Length = 634
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV HAT PG RV + + ++ +VH + P P P
Sbjct: 554 GEHPRVQ-HATDPGIDRVPSRRQSKDSAPAKVHPEGAVPAPSP 595
>SB_43173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + ++ +VH + AP P P
Sbjct: 341 GGHPRVQ-HVTDPGIDRVPSRRQSKDSAPAKVHAEGAAPAPSP 382
>SB_30424| Best HMM Match : Chorion_3 (HMM E-Value=5.6)
Length = 377
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + ++ +VH + AP P P
Sbjct: 301 GGHPRVQ-HVTDPGIDRVPSRWQSKDSAPAKVHAEGAAPTPSP 342
>SB_3238| Best HMM Match : Chorion_3 (HMM E-Value=1.6)
Length = 318
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + ++ +VH + AP P P
Sbjct: 238 GGHPRVQ-HVTDPGIDRVPSRRQSKDSAPAKVHAEGAAPAPSP 279
>SB_59337| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 480
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 422 HATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
H T PG RV + A + +VH + AP P P
Sbjct: 401 HVTDPGIDRVPSRRRSKAFAPAKVHAEGAAPAPSP 435
>SB_24603| Best HMM Match : GatB_Yqey (HMM E-Value=0.7)
Length = 984
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 192 PTSPGRSRGAGEVHGLRDEH----LRVRDIFTGLYSLDFDESGERAVEMALADAERFVL 356
P PGR +G E GL E+ LR RDI G+Y D ++ LA +++L
Sbjct: 57 PLLPGRQQGGPE--GLAPENVDATLRGRDISAGVYQEILDSMPDKEAPAVLAGLVQYIL 113
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 386 CVR-FGSEGRVDSHATQPGAGRVHTDGEDIAASGI 487
C++ F G+V +HA P GR+H D ++ G+
Sbjct: 892 CLKAFDGPGKVIAHAYYPSDGRLHFDDDETFTDGV 926
>SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48)
Length = 947
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 129 RKIHGHKMSIDPLPTGGNEEGPTSPGRSRGAGEVHGLRDEHLRVR 263
R+I+ +K SI +P G + P SRG G V LR+ ++R
Sbjct: 674 REINNNKASISRVPKGDKASSLSIPSTSRG-GPVKRLREAQNKIR 717
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Frame = +2
Query: 116 RDYASKDPRP*NVHRSTTNWRERRRSNKPWPVPGCWRSSWAP------GRAPPSPGYIHG 277
RD + P P +S + RRR P P RSS P PPSP
Sbjct: 910 RDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARR 969
Query: 278 TVLAGLRRERRESSGDGTGRCREIRIEASKGRWR 379
V + ++R++S+G + ++ +KG R
Sbjct: 970 KVASPEEQDRQKSNGRNSRSVSPSAVKRTKGSKR 1003
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 422 HATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
H T PG RV + A + +VH + AP P P
Sbjct: 619 HVTDPGIDRVPSRRPSKAFAPAKVHAEGAAPAPSP 653
>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
Length = 1497
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + A+ ++H + AP P P
Sbjct: 265 GGHPRVQ-HVTDPGIDRVPSRRRSKASVTAKMHAEGAAPAPSP 306
>SB_44108| Best HMM Match : Chorion_3 (HMM E-Value=0.81)
Length = 402
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV A + +VH + AP P P
Sbjct: 316 GGHPRVQ-HVTDPGIDRVPFRRRSKAFAPAKVHAEGAAPAPSP 357
>SB_26213| Best HMM Match : CITED (HMM E-Value=2.5)
Length = 172
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + +++ +VH + AP P P
Sbjct: 47 GGHPRVQ-HVTDPGIDRVPSRRRSNSSAPGKVHAEGAAPAPSP 88
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 193 QQALAGPGVLEKFMGSGTSTSESGIYSRDCTRWTST--RAAREQWRWHWPMPRDSY 354
+QA+ G G+ + + S Y+R WT R A WR HW +P + Y
Sbjct: 453 EQAVFGEGL--RTASGADEVAISLFYARKGVSWTHIHHRYAVVPWRAHWILPHEPY 506
>SB_58063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + ++ +VH + AP P P
Sbjct: 95 GGHPRVQ-HVTDPGFDRVPSRRQSKDSAPAKVHAEGEAPAPSP 136
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 422 HATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
H T PG RV A + +VH + AP P P
Sbjct: 425 HVTDPGTDRVPFRRRSKAFAPAKVHAEGAAPAPSP 459
>SB_58850| Best HMM Match : Pro_Al_protease (HMM E-Value=3.9)
Length = 378
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + ++ +VH + AP P P
Sbjct: 293 GGHPRVQ-HVTDPGIDRVPSRRQSKDSAPAKVHAEGVAPAPSP 334
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 422 HATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPPLVDLVSELGIFGVIIGT 577
H T PG R + A++ RVH + AP P PL+ + G T
Sbjct: 102 HVTDPGIDR---EVRSKASATARVHAEGAAPAPSPLMHAAHSMTAAGTASAT 150
>SB_43859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +2
Query: 170 NWRERRRSNKPWPVPGCWRSSWAPGRAPPSPGYIHGTVLAGLRRERRESSGDG--TGRCR 343
N R RR ++ + S + PPSPGY+ L R R S+ D T C
Sbjct: 2 NLRARREFHRSLSWTSSYFSDYDGESLPPSPGYLLVPHLTARMRSRVSSTDDSDKTTICS 61
Query: 344 EIRIEASKGR 373
E + A R
Sbjct: 62 EHTVNAGSVR 71
>SB_43172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Frame = +3
Query: 156 IDPLPTGGNEEGPTS--PGR--SRGAGEVHGLR----DEHLRVRDIFTGLYSLDFDESGE 311
+DPL G EEGP S P S G H LR D LR RDI G+Y D +
Sbjct: 154 VDPLLPGRREEGPKSLDPEEYYSLFVGGTH-LRFPSVDATLRGRDISAGVYQEILDSMPD 212
Query: 312 RAVEMALADAERFVL 356
+ LA + +L
Sbjct: 213 KEAPAVLAGLVQNIL 227
>SB_34695| Best HMM Match : CXC (HMM E-Value=4.7)
Length = 186
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 398 GSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
G RV H T PG RV + + ++ +VH + AP P P
Sbjct: 95 GGHPRVQ-HVTDPGFDRVPSRRQSKDSAPAKVHAEGEAPAPSP 136
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 431 VSHASQRVP--HFRTVHIIPATFPLRLQYESLGIGQCHLHCSLAALVEVQRVQSREYIPD 258
V H QR P HF H++P T R+ +++GIG + C V+ Q EYI +
Sbjct: 4 VFHKVQRYPPMHFWE-HVMP-TCSYRMGTKNMGIGVGIIDCVPLKKVKFGAKQEHEYIAN 61
Query: 257 SEVL 246
++L
Sbjct: 62 FKIL 65
>SB_57825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 510 APALSCTLIPEAAIS-SPSVCTRPAPGCVACESTRPSLPNRTHYSRHLP 367
A L T P++ +S SP CTRPA + E P +++HLP
Sbjct: 401 AALLVFTAAPKSRVSASPWACTRPAYTLIIHEREAPQPDWLFVFAKHLP 449
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +3
Query: 261 RDIFTGLY---SLDFDESGERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRH 431
+D F GL + F++ G V++ ++ R +L + + + R
Sbjct: 861 KDPFEGLLKYRNTPFEDIGVSPVQLLMSRRTRTMLPTHKRLLLPQPVNPDTVVKALKTRQ 920
Query: 432 SRERAAYILMERILPPLVSGYMIRPGRLSHRRWSTS 539
+ A Y + LPPL SG +R S ++W T+
Sbjct: 921 EKAAAYYNQNSKYLPPLESGSKVRIRTGSEKQWRTA 956
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +3
Query: 261 RDIFTGLY---SLDFDESGERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRH 431
+D F GL + F++ G V++ ++ R +L + + + R
Sbjct: 861 KDPFEGLLKYRNTPFEDIGVSPVQLLMSRRTRTMLPTHKRLLLPQPVNPDTVVKALKTRQ 920
Query: 432 SRERAAYILMERILPPLVSGYMIRPGRLSHRRWSTS 539
+ A Y + LPPL SG +R S ++W T+
Sbjct: 921 EKAAAYYNQNSKYLPPLESGSKVRIRTGSEKQWRTA 956
>SB_17222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 554
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 422 HATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPP 526
H T PG RV + + + +VH + AP P P
Sbjct: 485 HVTDPGIDRVPSRRQSKDPAPAKVHAEGAAPAPSP 519
>SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 293 LRRERRESSGDGTGRCREIRIEASK--GRWRE*CVRFGSEGRVDSHATQPGAGRVHTDGE 466
LRR RRE R ++ K G WRE F V+ AT P A H +
Sbjct: 841 LRRWRRELRAPNHPRPDLNTLDEPKPEGAWRELAAAFTRTPAVNQRATNPHATGPHVAAD 900
Query: 467 DI 472
D+
Sbjct: 901 DV 902
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 162 PLPTGGNEEGPTSPGRSRGAG 224
P P G +EGP PG +G G
Sbjct: 579 PPPPGAGQEGPPPPGAGQGGG 599
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,835,410
Number of Sequences: 59808
Number of extensions: 592226
Number of successful extensions: 2269
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2256
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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