Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31025
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78412-1|CAB01655.1| 490|Caenorhabditis elegans Hypothetical pr... 97 7e-21
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 31 0.97
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 31 0.97
Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 28 6.8
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 28 6.8
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 28 6.8
U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiestera... 27 9.1
U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiestera... 27 9.1
U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiestera... 27 9.1
U23179-11|AAN63447.1| 293|Caenorhabditis elegans Hypothetical p... 27 9.1
U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical p... 27 9.1
>Z78412-1|CAB01655.1| 490|Caenorhabditis elegans Hypothetical
protein M176.2 protein.
Length = 490
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +1
Query: 10 LNDKKQLILDGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTKK 189
LND+ L++DG VA+VY+R+GY P YP+ +EW+AR R+E STAIK P I Q+A TKK
Sbjct: 262 LNDRSDLMIDGRQVAIVYFRAGYSPDHYPSTKEWEARERMELSTAIKTPWIGLQVANTKK 321
Query: 190 VQQALAGPGVLEKFMG 237
QQ L+ GVLE+F+G
Sbjct: 322 TQQVLSEDGVLERFIG 337
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 VRDIFTGLYSLD-FDESGERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRHS 434
+R F G+++L+ DE + V A E FVLKPQ EGG G E+ L +
Sbjct: 345 IRASFAGMWALENTDEVTMKVVAGAQKHPEAFVLKPQTEGGAALHTGDEMVQMLRELPEE 404
Query: 435 RERAAYILMERILPPLVSGYMI 500
ER A+ILME++ P ++ Y++
Sbjct: 405 -ERGAFILMEKLKPMIIENYLV 425
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 509 APVPPPLVDLVSELGIFGVIIGTKEKIYCNRQVGHMLRTKLADANEGGVAAG 664
A P VSELG++G G K+ + GH+LRTK GGVAAG
Sbjct: 427 AKKPITFAKAVSELGVYGYAFGRKDAPEL-KTAGHLLRTKPESTAMGGVAAG 477
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 30.7 bits (66), Expect = 0.97
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 276 GLYSLDFDESG-ERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRHSRERAAY 452
GLY DF ES R + MA LK E N SEV +TR ++ A
Sbjct: 351 GLYLNDFGESDCNREIIMATIQKSD-TLKTMLE---NEKRRSEVLTEMTREISEAKKTAR 406
Query: 453 ILMERILPPLVSGYMIRPGRLSH 521
L+ +++P V+ M+R G + H
Sbjct: 407 TLLTQMMPYEVAQTMMRSGSVDH 429
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 30.7 bits (66), Expect = 0.97
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 276 GLYSLDFDESG-ERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRHSRERAAY 452
GLY DF ES R + MA LK E N SEV +TR ++ A
Sbjct: 351 GLYLNDFGESDCNREIIMATIQKSD-TLKTMLE---NEKRRSEVLTEMTREISEAKKTAR 406
Query: 453 ILMERILPPLVSGYMIRPGRLSH 521
L+ +++P V+ M+R G + H
Sbjct: 407 TLLTQMMPYEVAQTMMRSGSVDH 429
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 30.7 bits (66), Expect = 0.97
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 276 GLYSLDFDESG-ERAVEMALADAERFVLKPQREGGGNNVYGSEVRDALTRMRHSRERAAY 452
GLY DF ES R + MA LK E N SEV +TR ++ A
Sbjct: 351 GLYLNDFGESDCNREIIMATIQKSD-TLKTMLE---NEKRRSEVLTEMTREISEAKKTAR 406
Query: 453 ILMERILPPLVSGYMIRPGRLSH 521
L+ +++P V+ M+R G + H
Sbjct: 407 TLLTQMMPYEVAQTMMRSGSVDH 429
>Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical
protein F18H3.4 protein.
Length = 459
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 6 RTERQEATDIGXXXXXXXLLQIRVRAGTVSHRKGMGREITRRKIHGHKM 152
R E+ T+I LL+ A SHRKGM +E+ + +I HK+
Sbjct: 127 RDEQALVTEIDALKRNKKLLESL--AEITSHRKGMDQELEKNRIQKHKV 173
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 395 FGSEGRVDSHATQPGAGRVHTDGEDIAASGIRVHDKAGAPVPPPL 529
+GS+G D + G T + I + I + DK +P PPPL
Sbjct: 413 YGSDGISDCRESTASDGTQKTLSDRIEVTDI-IFDKVKSPTPPPL 456
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 571 NNDPKYSEFRHEVDQRRWDRRPGLIMYPD 485
+ DP ++F HE+++ + + GLI+ P+
Sbjct: 639 SEDPNATQFEHEIEEHKEPEKLGLIIDPE 667
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 571 NNDPKYSEFRHEVDQRRWDRRPGLIMYPD 485
+ DP ++F HE+++ + + GLI+ P+
Sbjct: 637 SEDPNATQFEHEIEEHKEPEKLGLIIDPE 665
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 571 NNDPKYSEFRHEVDQRRWDRRPGLIMYPD 485
+ DP ++F HE+++ + + GLI+ P+
Sbjct: 639 SEDPNATQFEHEIEEHKEPEKLGLIIDPE 667
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 571 NNDPKYSEFRHEVDQRRWDRRPGLIMYPD 485
+ DP ++F HE+++ + + GLI+ P+
Sbjct: 637 SEDPNATQFEHEIEEHKEPEKLGLIIDPE 665
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 467 DIAASGIRVHDKAGAPVPPPLVDLVSELGIFGVIIGTKE-KIYCNRQVGHMLRTKLADAN 643
D+ V+ P PPP VD+ +L VI+ T++ + + + V H+ R +D N
Sbjct: 132 DVGMKASAVNTCIANPSPPPYVDVPKDLLGPCVILQTRQIEEHKEQSVKHVRRASASDVN 191
Query: 644 E 646
+
Sbjct: 192 K 192
>U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforme protein.
Length = 612
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 100 AREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGPGVLEKFMGSGTSTSESGIY 270
AR +LR +STA+ HY AG+ L G + S + ES +Y
Sbjct: 5 ARRKQFKLRPWQSTALPSRHDHYSCAGSATAADGLGGAHLTPSLSSSVHARRESFLY 61
>U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformb protein.
Length = 626
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 100 AREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGPGVLEKFMGSGTSTSESGIY 270
AR +LR +STA+ HY AG+ L G + S + ES +Y
Sbjct: 19 ARRKQFKLRPWQSTALPSRHDHYSCAGSATAADGLGGAHLTPSLSSSVHARRESFLY 75
>U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformg protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 100 AREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGPGVLEKFMGSGTSTSESGIY 270
AR +LR +STA+ HY AG+ L G + S + ES +Y
Sbjct: 66 ARRKQFKLRPWQSTALPSRHDHYSCAGSATAADGLGGAHLTPSLSSSVHARRESFLY 122
>U23179-11|AAN63447.1| 293|Caenorhabditis elegans Hypothetical
protein C27D6.4c protein.
Length = 293
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 470 YPLHQYVRGPLPAVSHASQRVPHFRTVHII--PATFPLRLQYESLGIGQCHLHCS 312
+ LHQ PLP+V+H S H H++ P+ L++ + G H + S
Sbjct: 85 HQLHQQQLSPLPSVAHFSH--SHHLQHHVVQHPSQASLQMNMNQIFSGPSHQYAS 137
>U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical
protein C27D6.4b protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 470 YPLHQYVRGPLPAVSHASQRVPHFRTVHII--PATFPLRLQYESLGIGQCHLHCS 312
+ LHQ PLP+V+H S H H++ P+ L++ + G H + S
Sbjct: 121 HQLHQQQLSPLPSVAHFSH--SHHLQHHVVQHPSQASLQMNMNQIFSGPSHQYAS 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,940,135
Number of Sequences: 27780
Number of extensions: 422290
Number of successful extensions: 1400
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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