Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31023
         (633 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB73BC Cluster: PREDICTED: similar to Guanine nu...    89   8e-17
UniRef50_A5DTF7 Cluster: Putative uncharacterized protein; n=1; ...    36   0.81 
UniRef50_A7BZJ6 Cluster: Putative uncharacterized protein; n=3; ...    36   1.1  
UniRef50_UPI00006CD1CC Cluster: hypothetical protein TTHERM_0012...    35   1.9  
UniRef50_A2SST0 Cluster: H(+)-transporting two-sector ATPase; n=...    35   1.9  
UniRef50_Q6MIX9 Cluster: Putative uncharacterized protein precur...    34   2.5  
UniRef50_A4VTC3 Cluster: Transcriptional regulator; n=4; Strepto...    34   3.3  
UniRef50_A0BNY6 Cluster: Chromosome undetermined scaffold_119, w...    33   4.3  
UniRef50_A5DWX4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  

>UniRef50_UPI0000DB73BC Cluster: PREDICTED: similar to Guanine
           nucleotide exchange factor DBS (DBLs big sister) (MCF2
           transforming sequence-like protein); n=2; Apocrita|Rep:
           PREDICTED: similar to Guanine nucleotide exchange factor
           DBS (DBLs big sister) (MCF2 transforming sequence-like
           protein) - Apis mellifera
          Length = 1340

 Score = 89.0 bits (211), Expect = 8e-17
 Identities = 41/52 (78%), Positives = 44/52 (84%)
 Frame = +3

Query: 3   YRHRLNIAELTKSEHDMYLMGITMASLANPAETSRHKVRRRLRACYVYQGRK 158
           YRHRLNIAELTK+EHDMYLMG+TMA L NP ET+RH  RRRLRA YVYQ  K
Sbjct: 120 YRHRLNIAELTKAEHDMYLMGVTMACLTNPYETARHTERRRLRAQYVYQETK 171



 Score = 38.3 bits (85), Expect = 0.15
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +2

Query: 425 SRKHLFEAYKEYGEILEPGVKLMGYSTFERL*KTSF 532
           +RK ++++Y +Y   + P +K+MGYSTF R  K  F
Sbjct: 189 TRKVVYDSYIQYCRKISPDIKIMGYSTFRRFMKVQF 224


>UniRef50_A5DTF7 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 361

 Score = 35.9 bits (79), Expect = 0.81
 Identities = 16/55 (29%), Positives = 32/55 (58%)
 Frame = +2

Query: 314 ATNFLKEYLKQHANSPKDVQPSGEGKKGSKTIIIQGDSRKHLFEAYKEYGEILEP 478
           +TNF+K  +K+H  + K+  P+  G  G+ + I  G++ K   E + +Y + ++P
Sbjct: 240 STNFVKNMVKKHGQNFKESTPTTNGGSGANSSIASGNTSKQ--EDFDDYEDSVDP 292


>UniRef50_A7BZJ6 Cluster: Putative uncharacterized protein; n=3;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 636

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
 Frame = +3

Query: 6   RHRLNIAELTKSEHDMYLMGITMASLANPAET-SRHKVRRRLRACYVYQ---GRKVCLEA 173
           R R     L++ E + +++      + + +++ S  +V+ R+R  + Y     R VC + 
Sbjct: 81  RSRKEFDSLSRDEKNTFILSQLHLFMHHSSQSCSARQVKTRIRQKFDYHISIDRPVCKDV 140

Query: 174 FLYLENVTHYQLKRIRQHVMTHGVAPRYMEMLVRSP 281
           FL+    T  +LKR+++H++  G++      + R P
Sbjct: 141 FLFYYGETIARLKRLQKHLLEMGISSSTHGNIGRQP 176


>UniRef50_UPI00006CD1CC Cluster: hypothetical protein TTHERM_00129630;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00129630 - Tetrahymena thermophila SB210
          Length = 1586

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +2

Query: 284  NTFTLDIYKHATNFLKEYLKQHANSPKDVQPS 379
            NT+ L+IY++ATNF +EY+KQ+ N   + Q S
Sbjct: 1321 NTYALNIYENATNF-QEYVKQYENISSNFQYS 1351


>UniRef50_A2SST0 Cluster: H(+)-transporting two-sector ATPase; n=1;
           Methanocorpusculum labreanum Z|Rep: H(+)-transporting
           two-sector ATPase - Methanocorpusculum labreanum (strain
           ATCC 43576 / DSM 4855 / Z)
          Length = 661

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -3

Query: 130 LNLLLTLCREVSAGFAKLAIVMPIKYMSCSLFVSSAM 20
           L+ +L+ CR  + G + +AI M + +M+  LF+S AM
Sbjct: 556 LSHMLSFCRLAAVGLSSVAIAMVVNFMAVDLFISPAM 592


>UniRef50_Q6MIX9 Cluster: Putative uncharacterized protein
           precursor; n=1; Bdellovibrio bacteriovorus|Rep: Putative
           uncharacterized protein precursor - Bdellovibrio
           bacteriovorus
          Length = 325

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 326 LKEYLKQHANSPKDVQPSGEGKKGSKTIIIQGDSRKHLFEAYKEYGEILE 475
           L    K +AN PK ++P    +      +IQGD +KHL EA K   E+ E
Sbjct: 229 LNRVYKNYANYPKAMKPFVYKQLVLNHSLIQGDLKKHLAEAAKSKDEVWE 278


>UniRef50_A4VTC3 Cluster: Transcriptional regulator; n=4;
           Streptococcus suis|Rep: Transcriptional regulator -
           Streptococcus suis (strain 05ZYH33)
          Length = 235

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = +3

Query: 48  DMYLMGITMASLANPAETSRHKVRRRLRACYVYQGRKVCLEAFLYLENVTHYQLKRIR 221
           D YL  I  A   N  + S+H+++ +L + Y+ QG++  +  F   + V  Y++ R+R
Sbjct: 74  DQYLSEIKTAGELN--KRSQHQIQTQLTSLYIIQGQEDLMSTFEVDDKVDFYRVSRVR 129


>UniRef50_A0BNY6 Cluster: Chromosome undetermined scaffold_119, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_119, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1037

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 26/90 (28%), Positives = 40/90 (44%)
 Frame = +3

Query: 219  RQHVMTHGVAPRYMEMLVRSPITLSL*TYTNMQRISLRNI*SNMQILLKMFSLQEKVRKA 398
            RQH+ T  V  +   MLV  P  L   ++ N+    +R   +N   L K     E  +  
Sbjct: 840  RQHLRTKSVMNKKQTMLVELPTFLQSQSF-NLSNSGIRQ--NNQPDLSKQMQYWEDRQNQ 896

Query: 399  AKPLLSKETLESTCSRLIRSMEKS*NQVLN 488
             + L+ K+TLE   ++L    E+S  Q  N
Sbjct: 897  QRQLIKKQTLEKRQAKLQIQQERSFYQDFN 926


>UniRef50_A5DWX4 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 761

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +2

Query: 293 TLDIYKHATNFLKEYLKQHANSPKDVQPSGEGKKGSKTIIIQGDSRKHLFEAYKEYGE 466
           T D  +  T    E L+   NS K VQP+ +G+  +    +  D  + LF  YK  GE
Sbjct: 535 TYDDQERTTGSTSESLQSQPNS-KRVQPAEDGRNQTGNSTVLDDRERFLFSVYKRDGE 591


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,775,699
Number of Sequences: 1657284
Number of extensions: 13097114
Number of successful extensions: 30240
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30237
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)