Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31015
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 80 2e-15
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 73 3e-13
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 41 0.001
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 40 0.003
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.010
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 38 0.010
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 36 0.041
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 36 0.041
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 33 0.22
03_01_0249 - 1935355-1935827,1936129-1936330 32 0.38
02_04_0487 + 23353587-23354603 32 0.38
02_04_0484 + 23307119-23308135 32 0.38
05_06_0246 + 26656629-26656907,26657001-26657228,26657595-266576... 31 0.88
11_06_0584 - 25220371-25222917 31 1.2
02_05_1202 + 34932291-34933027,34933297-34933774 31 1.2
06_01_0611 + 4420873-4422207 30 2.0
01_06_0445 - 29441472-29442152,29442244-29442357,29442959-294431... 30 2.0
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 3.5
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 4.7
08_02_0606 - 19259590-19260417 29 4.7
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 29 4.7
01_01_0735 + 5730783-5733320 29 4.7
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 28 6.2
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 8.2
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 28 8.2
01_04_0051 + 15430980-15431591 28 8.2
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 79.8 bits (188), Expect = 2e-15
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 199
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 200 VLLTESNAIAYYVANES-LPE 259
V ESNAIA YV + S PE
Sbjct: 625 VF--ESNAIARYVLSSSHFPE 643
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 20 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 199
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 200 VLLTESNAIAYYV 238
V ESNAIA YV
Sbjct: 64 VF--ESNAIARYV 74
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 256 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 435
G L A + QW +S +E+ + W+FP LG + + E A + L +L L+ H
Sbjct: 655 GSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTH 714
Query: 436 LLTRTFLVTERITLADVIV 492
L + T+LV +TLAD+++
Sbjct: 715 LASNTYLVGHSVTLADIVM 733
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 256 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 435
G L A + QW +S +E+ W++P LGI + + E A + L +L L+ H
Sbjct: 94 GSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTH 153
Query: 436 LLTRTFLVTERITLADVIV 492
L + T+LV +TLAD+++
Sbjct: 154 LASNTYLVGHSVTLADIVM 172
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = +3
Query: 417 KSTGRTSSHTHLPCYRENHTCRCHCLQYTA---AAFQHVLDPSVRSSLINVQRWFLTVAH 587
+S G ++H Y H+ + T F ++ S S +V+R+F T+ +
Sbjct: 145 RSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVN 204
Query: 588 QPQVSAVVGSLTLCAAPPTYDPK 656
QP V+G + + P K
Sbjct: 205 QPNFKKVLGDVKQAESVPPVQKK 227
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = +3
Query: 417 KSTGRTSSHTHLPCYRENHTCRCHCLQYTA---AAFQHVLDPSVRSSLINVQRWFLTVAH 587
+S G ++H Y H+ + T F ++ + S +V+R+F T+ +
Sbjct: 706 RSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVN 765
Query: 588 QPQVSAVVGSLTLCAAPPTYDPK 656
QP V+G + + P K
Sbjct: 766 QPNFKKVMGDVKQADSVPQVQKK 788
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +2
Query: 2 PTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAF 181
P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P
Sbjct: 22 PVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVL 81
Query: 182 ESADGKVLLTESNAIAYYVA 241
E+ +G V ESNAIA YVA
Sbjct: 82 ETPEGAVF--ESNAIARYVA 99
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +1
Query: 256 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 435
G L + + QW +S +E+ W++P LG + E A + L +L L+ H
Sbjct: 109 GSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTH 168
Query: 436 LLTRTFLVTERITLADVIV 492
L + T+LV +TLAD+++
Sbjct: 169 LASNTYLVGHSVTLADIVM 187
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Frame = +3
Query: 405 TGRLKSTGRTSSHTHLPCYRENHTCRCHCLQYTAA---AFQHVLDPSVRSSLINVQRWFL 575
T +S G ++H Y H+ + T F +L S S +V+R+F
Sbjct: 156 TSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFW 215
Query: 576 TVAHQPQVSAVVGSLTLCAAPPTYDPKKY--QELAGAQNKKE 695
T+ +QP V+G + P K +E + KKE
Sbjct: 216 TMVNQPNFKKVIGDFKQAESVPPVQKKAAPPKESKAKEAKKE 257
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 238
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 232
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 233 YV 238
Y+
Sbjct: 74 YI 75
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 232
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 233 YV 238
Y+
Sbjct: 74 YI 75
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +2
Query: 8 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 187
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 188 ADGKVLLTESNAIAYYV 238
DG + L ES AI+ Y+
Sbjct: 60 -DGDLTLFESRAISKYI 75
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 35.5 bits (78), Expect = 0.041
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 23 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 199
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 200 VLLTESNAIAYYVANESLPEEIWLPK 277
++ +S AIA Y+ + PE LP+
Sbjct: 73 AVIGDSYAIALYL-EDKYPEHPLLPQ 97
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +1
Query: 397 SDLLAALKVLDGHLLTRTFLVTERITLADVIVF 495
S+ AA LDG+L +RTFLV+ +++AD++V+
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVW 125
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 397 SDLLAALKVLDGHLLTRTFLVTERITLADVIVF 495
S+ A +DG+L++RTFLV +T+AD+ V+
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVW 123
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 128 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE 247
+KS FLK P G+VPAF+ D + ES AI Y+ ++
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQ 79
>02_04_0487 + 23353587-23354603
Length = 338
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 293 HCQTRAWVARSPPGDFHWQRSKRWHCFQLGAPFHRH 186
H T W R PGD HW + + Q G P H H
Sbjct: 128 HADTVLWYCR--PGDNHWVKRHQHQYLQPGPPHHEH 161
>02_04_0484 + 23307119-23308135
Length = 338
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 293 HCQTRAWVARSPPGDFHWQRSKRWHCFQLGAPFHRH 186
H T W R PGD HW + + Q G P H H
Sbjct: 128 HADTVLWYCR--PGDNHWVKRHQHQYLQPGPPHHEH 161
>05_06_0246 +
26656629-26656907,26657001-26657228,26657595-26657630,
26658362-26658475,26658562-26659167
Length = 420
Score = 31.1 bits (67), Expect = 0.88
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = -1
Query: 335 AQEAGSSSLSDHDAHCQTRAWVARSPPGDFHWQRSKRWHCFQLGAPFHRHFRMQALFRQE 156
A +A S+ S+ DA A V R+PP DF R + W ++ A F +AL
Sbjct: 44 AGDASESASSEADAFSSVVAAVVRAPPRDFRVIR-QEWAAVRVQAAFRAFLARRALKALR 102
Query: 155 TSSRSLRTCWSRQIRNSVLLSHQSRNIVRR 66
R R +R + ++ + N + R
Sbjct: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLR 132
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 467 LSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 303
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 370 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVF 495
+++ + A +L AAL L+ HL +L + +TLADV +F
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLF 293
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2
Query: 542 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 631
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>01_06_0445 -
29441472-29442152,29442244-29442357,29442959-29443186,
29443284-29443586
Length = 441
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 347 GKTQAQEAGSSSLSDHDAHCQTRAWVARSPPGDFHWQRSKRWHCFQLGAPFHRHFRMQAL 168
G A E S + S DA A V R+PP DF R + W ++ F +AL
Sbjct: 48 GNASASEVYSETSSSADALSSVVAAVVRAPPRDFRLIR-QEWAAVRIQTAFRAFLARRAL 106
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 143 FLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLP 256
FLK P GKVP F DGK + +S+ I V E P
Sbjct: 49 FLKISPEGKVPVFNGGDGK-WIPDSDVIT-QVIEEKYP 84
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 440 SHAPSLLPRESHLPMSLSS 496
+H PSL+P ESHL S+SS
Sbjct: 498 NHQPSLVPNESHLNNSVSS 516
>08_02_0606 - 19259590-19260417
Length = 275
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 497 VHCCCFPARARPERPFVADKRSALVPDRRPPAASVGRRRLAHALCG 634
+H CC A A E L+P+ PP A+ G RR+ A CG
Sbjct: 59 LHTCCALAPATREHRLFPGCTFVLLPEPPPPTAA-GERRICDA-CG 102
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = -1
Query: 287 QTRAWVARSPPGDFHWQRSKRWHCFQLGAPFHRHFRMQALFRQETSSRSLRTCWSRQIRN 108
Q +W ++ + +W + +GAP ++ F Q + +Q+ + + QI
Sbjct: 468 QAMSWCRFKLSANYFLSKPYQWRKYIVGAPAYQGFHFQGMIKQQIDGVDMMLLYYHQI-- 525
Query: 107 SVLLSHQSRNIV 72
S++ S ++V
Sbjct: 526 SIVYCSVSEDVV 537
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 103 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 204
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 455 RKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLS 306
+K RVR PSST ++A+RS C + + + A+ SS LS
Sbjct: 425 KKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLS 474
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 389 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 270
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 503 CCCFPARARPERPFVADKRSALVPDRRPPAASVGRR-RLAHAL 628
CCC + A P R F A +A R A VGR LAH L
Sbjct: 4 CCCSTSSAVPGRRFAAAGAAAAAVAARWGAVGVGRAVVLAHPL 46
>01_04_0051 + 15430980-15431591
Length = 203
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 509 CFPARARPERPFVADKRSALVPDRRPPAASVGRRRLAHA 625
C R P ++ A+ P RRP A+ GRRR HA
Sbjct: 15 CMRQRRDPLLASLSRSSLAIEPPRRPCHAADGRRRRTHA 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,665,360
Number of Sequences: 37544
Number of extensions: 510104
Number of successful extensions: 1673
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1673
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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