Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31015
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 23   LYTYPENFRAYKALIAAQYSGTDVKVA 103
            L+  PE+F A  ALI+ Q  G  + VA
Sbjct: 1616 LFRKPEHFVASYALISNQCEGDSLNVA 1642


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 299 DAHCQTRAWVARSPPGDFH 243
           + H Q  + +ARSP G  H
Sbjct: 73  EVHAQVYSCLARSPAGSVH 91



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/56 (23%), Positives = 20/56 (35%)
 Frame = -3

Query: 588  GGRRSGTNAERLSATNGRSGLARAGKQQQCTEDNDIGKCDSLGNKEGACEKMSVQY 421
            G   SGT    +      S  +R+G Q    ++    +  S G   G     S +Y
Sbjct: 1752 GNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTHNVFSPEY 1807


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 109 FRIWRDQQVRRLLEEVSCRKSACIRKCRWKG 201
           F IWRD    ++ E  +   +A   +  W G
Sbjct: 32  FEIWRDSLPTKMRELNATACAALYERVEWSG 62



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 477 KCDSLGNKEGACEKMSVQYF*GGQ*VRLC 391
           KC++L      C + SV Y  G    +LC
Sbjct: 354 KCNTLERTPSKCSQTSVHYSNGQTHSQLC 382


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 636 PPTYDPKKYQELAGAQNKKE 695
           PP  D    +EL+GA+ +KE
Sbjct: 690 PPQVDEVDDKELSGAEEEKE 709


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/47 (23%), Positives = 18/47 (38%)
 Frame = +1

Query: 217 QCHRLLRCQ*KSPGGDLATQARVWQWASWSDSELLPASCAWVFPYLG 357
           +C    +C+  +PGG +  +          D  LL   C  + P  G
Sbjct: 61  KCEIYAKCEFLNPGGSVKDRIAYRMIQDAEDKGLLKPGCTIIEPTSG 107


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 531 GLARAGKQQQCTEDNDIGKCDS 466
           G+ +AGK ++ T+D D  + D+
Sbjct: 74  GIQQAGKPKEETDDKDDDESDN 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,262
Number of Sequences: 438
Number of extensions: 4776
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)