Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31008
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.2  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    22   5.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.1  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 530 RRMSTVPTPNNDSK 489
           +  S +PTPN DS+
Sbjct: 353 KHTSCIPTPNGDSR 366


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 530 RRMSTVPTPNNDSK 489
           +  S +PTPN DS+
Sbjct: 353 KHTSCIPTPNGDSR 366


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 321 EKNRIPLEHGFAN 359
           E+NR+ + +GFAN
Sbjct: 2   ERNRVKVNNGFAN 14


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 399 LQELQLETIPHPPYSRNRAPTEYDF 325
           +Q+L +      PY  ++AP  YD+
Sbjct: 421 VQQLGILRYAKGPYQPSQAPPTYDY 445


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 399 LQELQLETIPHPPYSRNRAPTEYDF 325
           +Q+L +      PY  ++AP  YD+
Sbjct: 421 VQQLGILRYAKGPYQPSQAPPTYDY 445


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 288 TFYHVENFTNPE 323
           T YH ENF N E
Sbjct: 222 TIYHQENFENYE 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,769
Number of Sequences: 336
Number of extensions: 3538
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)