Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31006
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    23   2.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   8.5  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 459 RRVGSAHSSLDEILDQKHTQCLHTFDPFHFALSRHRLHEVFANFT 325
           R+VGS+ S + E+ +      L T  PF     + +L E F   T
Sbjct: 31  RKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEET 75


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 15  PSRRALGAPRRYCDGGAVETLVL*LAGDAAYCSMTSDF 128
           P  RA+G P        VETL   L G+ A   +T  F
Sbjct: 636 PDARAMGYPFDRQPRAGVETLAQFLTGNMAVTEVTVRF 673


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 406 YPVLTYIRSIPFCLIPTSSTRSLCKLYEY 320
           YP +TY   +PF   P  S   + K Y+Y
Sbjct: 296 YPTMTYSNGLPFPQRPIWSNFPIYK-YKY 323


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 406 YPVLTYIRSIPFCLIPTSSTRSLCKLYEY 320
           YP +TY   +PF   P  S   + K Y+Y
Sbjct: 296 YPTMTYSNGLPFPQRPIWSNFPIYK-YKY 323


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 410 NIPSAYIHSIHSI 372
           NI +  IHSIHSI
Sbjct: 103 NITTTTIHSIHSI 115


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 248 LNTTCHYLTLLFQRNMSNGIHLSEVW 171
           L  TC  +T +  RN++N + +   W
Sbjct: 10  LGITCQGVTDIHSRNLTNSLKVIYEW 35


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 191 IHLSEVWFTN*ILFYFARL 135
           I  SE+WF    +F FA +
Sbjct: 291 IKASEIWFLGCTIFLFAAM 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,744
Number of Sequences: 438
Number of extensions: 4018
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)