Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31005X
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.83 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   0.83 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   3.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   3.3  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.8 bits (49), Expect = 0.83
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 331 LLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
           LLS +GEL+  L    E    +  +  ++   D + Q IY +     D
Sbjct: 422 LLSAYGELLHALSDKPELRPFEPAVTAVQPYQDQEYQPIYFVAESFDD 469


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 0.83
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 397 QKMNELKAEVDSKDQDIYHLQR 462
           QK+ +L  EVD   QD+  L+R
Sbjct: 289 QKLRDLNREVDQIKQDVEDLKR 310


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 3  NIKQCYYFYC 32
          N+++ YYFYC
Sbjct: 52 NLRRIYYFYC 61


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = -3

Query: 198 CDAIALY-----SLTAFFNINDMYYFLISYELDKRPPNAATLGISCIKNATMYVVTTFNV 34
           CD+ +++     SL     I D Y  L S  L +       + +S +KN   Y    +++
Sbjct: 235 CDSFSIFGLVWISLIFVVLIGDAYAVLNSV-LFQNVYKPLPIVLSIVKNCLSYCFNLYHL 293

Query: 33  YSKNNNI 13
            SK+N +
Sbjct: 294 ASKSNQL 300


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = -3

Query: 198 CDAIALY-----SLTAFFNINDMYYFLISYELDKRPPNAATLGISCIKNATMYVVTTFNV 34
           CD+ +++     SL     I D Y  L S  L +       + +S +KN   Y    +++
Sbjct: 235 CDSFSIFGLVWISLIFVVLIGDAYAVLNSV-LFQNVYKPLPIVLSIVKNCLSYCFNLYHL 293

Query: 33  YSKNNNI 13
            SK+N +
Sbjct: 294 ASKSNQL 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,516
Number of Sequences: 336
Number of extensions: 2218
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)