Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31005X
(476 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18392| Best HMM Match : DUF1635 (HMM E-Value=5.3) 35 0.039
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 32 0.21
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 31 0.64
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 31 0.64
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 29 1.5
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 29 1.5
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 2.0
SB_46152| Best HMM Match : DUF241 (HMM E-Value=0.62) 29 2.0
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 29 2.6
SB_46247| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 28 3.4
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 4.5
SB_49606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_12464| Best HMM Match : Nsp1_C (HMM E-Value=0) 27 7.9
SB_6255| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_55645| Best HMM Match : Herpes_UL73 (HMM E-Value=5.2) 27 7.9
>SB_18392| Best HMM Match : DUF1635 (HMM E-Value=5.3)
Length = 178
Score = 34.7 bits (76), Expect = 0.039
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 316 QLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
Q+ + L S+ EL + A EQ K QQ + LK + KD+ I L+ QLK+
Sbjct: 6 QVLEKLTSKDKELQAAVVQAKEQQKRQQDIESLKLHIAKKDEKILALEVQLKE 58
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/74 (21%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQ-AKIQQKMNELKAEVDS 432
++ +V + + + H + L +SE G ++ L+ A ++ +K++ ++ L+ ++D
Sbjct: 831 QLYDVQMESDEKTIIGKLHHHIVALQVSE-GTAVRKLEAATQKVSKLEAQILRLEQKIDE 889
Query: 433 KDQDIYHLQRQLKD 474
KDQ +YH + + ++
Sbjct: 890 KDQILYHSKTEARN 903
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/34 (32%), Positives = 24/34 (70%)
Frame = +1
Query: 373 ADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
+DE K+ + M EL++ ++ +++ I L+++LKD
Sbjct: 130 SDELGKVWETMTELQSVIEDREKSIDKLEKELKD 163
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 30.7 bits (66), Expect = 0.64
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 262 IEVSIAPKPQKVSAADHAQL-TDLLLSEHGELIQTLDLADEQAKIQQKMN--ELKAEVDS 432
+E S+ K + S +L L E +Q LD + Q + ++ +LKA++ +
Sbjct: 384 LEKSVDSKEELASELSSKKLEVSKLEKELRTAMQDLDNSKVQKENEKSETILKLKADIQA 443
Query: 433 KDQDIYHLQRQLKD 474
KD+ I L+RQLK+
Sbjct: 444 KDEQIEELERQLKE 457
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 373 ADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
+DE K+ + M EL++ ++ + + I L+++LKD
Sbjct: 574 SDELGKVWETMTELQSVIEDRGKSIDKLEKELKD 607
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 373 ADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
+DE K+ + M EL++ ++ + + I L+++LKD
Sbjct: 38 SDELGKVWETMTELQSVIEDRGKSIDKLEKELKD 71
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 319 LTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDIYH 453
LT L E+ ++ D A++QQ +L+ E+D+ DQ ++H
Sbjct: 3 LTSKLQDVFNEVDESADHRISWAELQQCCKKLQIELDNDDQSVFH 47
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 358 QTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
Q L DE+ +++ +NELK+++D +Q+I + ++D
Sbjct: 1451 QVNTLRDEKNIVERDLNELKSKIDYYNQEIESRDKTIED 1489
>SB_46152| Best HMM Match : DUF241 (HMM E-Value=0.62)
Length = 1110
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 307 DHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQL 468
D A+L LL+S+ ++ + E+++I + + K + KD+ I HLQ+Q+
Sbjct: 974 DEARLLTLLVSD---VLSKTVMDFEESEINPVIAQAKQALQDKDEQIKHLQQQM 1024
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +1
Query: 304 ADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
+D ++T LL S+ +L + + ++ K +++ ELK + +++ ++ LQ QLK
Sbjct: 66 SDLEEMTSLLQSKKVDLEK---IKEQNEKAAKELTELKGSLSTREAEVESLQGQLK 118
>SB_46247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 406 SFSVGSLLVRQLGLMFVSILHVLIEVGPST 317
S+S+GSL R L + +IL +LI + PST
Sbjct: 10 SWSLGSLEERNARLRYDAILFILIRIRPST 39
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +1
Query: 343 HGELIQTLDLADEQAK--IQQKMNELKAEVDSKDQDI 447
+GEL+Q L+L+++ AK + + M EL+++ DS ++
Sbjct: 23 YGELVQVLELSEKIAKSALDETMAELQSQQDSATSEM 59
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 325 DLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
D +L H + + + + ++ + + ELK ++ ++DQ I LQR LK
Sbjct: 906 DAILGAHAAASK--QMGEGEKRLTEHIAELKRQLTARDQIIQRLQRDLK 952
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 304 ADHAQLTDLLLSEHGELIQTL--DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
A+H + L S H + +Q L +L + A +QQK ++L ++ K +++ QR+ K
Sbjct: 1395 AEHEREKKELKSLHNKELQELQNNLKQQLAVVQQKSDKLSEDLKVKIEEVEIAQREAK 1452
>SB_49606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 376 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
+E+ +Q K+ + + ++D+K QDI LQ Q K
Sbjct: 75 EEKEDMQDKVEDCQLKLDTKKQDIEKLQDQEK 106
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 364 LDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
+ L D+Q +++Q++ EL + S +QD +Q + K+
Sbjct: 801 IQLEDQQGRLEQEIRELLMKEASTEQDQIEIQLKTKE 837
>SB_12464| Best HMM Match : Nsp1_C (HMM E-Value=0)
Length = 467
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 325 DLLLSEHGELIQTLDLADEQAKIQQK-MNELKAEVDSKDQDIYHLQRQLKD 474
D LL E+GE I L+ E K +QK ++E + ++ +++ L + L+D
Sbjct: 320 DRLLMENGEKITELNSGVESVKAEQKRLDEELNFISAQQRELEDLLKPLED 370
>SB_6255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 142 IHIVYIK-KSC*AI*SYGVTFKY*RSLIGTNR*YRTYC 252
+HI YI SC + SYGVT ++ NR TYC
Sbjct: 222 MHIAYITASSCDELLSYGVTASGEYAIYPRNRLVYTYC 259
>SB_55645| Best HMM Match : Herpes_UL73 (HMM E-Value=5.2)
Length = 148
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 246 LLLGNNRSFHSTKTTESVRCRSCSVDGPTSIRTWRIDTNI 365
LL + +FHSTK+T RSCSV T + TNI
Sbjct: 21 LLRSSTLTFHSTKSTNQ---RSCSVPASTRGFPAHVVTNI 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,087,611
Number of Sequences: 59808
Number of extensions: 225220
Number of successful extensions: 622
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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