Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31005X
(476 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541830-1|CAG46629.1| 270|Homo sapiens VDRIP protein. 53 4e-07
CR457276-1|CAG33557.1| 270|Homo sapiens VDRIP protein. 53 4e-07
AL158196-4|CAI17020.1| 270|Homo sapiens mediator of RNA polymer... 53 4e-07
AL158196-3|CAI17019.1| 238|Homo sapiens mediator of RNA polymer... 53 4e-07
AK223017-1|BAD96737.1| 270|Homo sapiens mediator of RNA polymer... 53 4e-07
AK222713-1|BAD96433.1| 270|Homo sapiens mediator of RNA polymer... 53 4e-07
AK001934-1|BAA91987.1| 270|Homo sapiens protein ( Homo sapiens ... 53 4e-07
AF300618-1|AAG22542.1| 270|Homo sapiens vitamin D receptor-inte... 53 4e-07
AF230381-1|AAF37289.1| 270|Homo sapiens p36 TRAP/SMCC/PC2 subun... 53 4e-07
AL158196-2|CAI17018.1| 224|Homo sapiens mediator of RNA polymer... 50 4e-06
BC070091-1|AAH70091.1| 366|Homo sapiens CARD9 protein protein. 32 0.90
BC008877-1|AAH08877.1| 492|Homo sapiens CARD9 protein protein. 32 0.90
AL592301-4|CAI13932.1| 536|Homo sapiens caspase recruitment dom... 32 0.90
AL592301-3|CAI13931.1| 492|Homo sapiens caspase recruitment dom... 32 0.90
AK024001-1|BAB14766.1| 366|Homo sapiens protein ( Homo sapiens ... 32 0.90
AF311287-1|AAG28790.1| 536|Homo sapiens caspase recruitment dom... 32 0.90
X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for ... 30 3.6
X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for ... 30 3.6
M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C m... 30 3.6
BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein. 30 3.6
BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein. 30 3.6
BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein. 30 3.6
AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript va... 30 3.6
AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript va... 30 3.6
AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript va... 30 3.6
AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antige... 30 3.6
AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein. 30 3.6
AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein. 30 3.6
AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein. 30 3.6
AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein. 30 3.6
AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein. 30 3.6
AY354204-1|AAQ63889.2| 972|Homo sapiens retinoic acid induced 1... 30 4.8
BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 1... 29 6.3
AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein. 29 6.3
AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment e... 29 6.3
AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein. 29 6.3
L06147-1|AAA35920.1| 620|Homo sapiens golgin-95 protein. 29 8.3
BT007248-1|AAP35912.1| 345|Homo sapiens golgi autoantigen, golg... 29 8.3
BC069268-1|AAH69268.1| 990|Homo sapiens golgi autoantigen, golg... 29 8.3
BC014188-1|AAH14188.2| 678|Homo sapiens GOLGA2 protein protein. 29 8.3
AL590708-22|CAI13841.1| 990|Homo sapiens golgi autoantigen, gol... 29 8.3
AL590708-21|CAI13842.1| 952|Homo sapiens golgi autoantigen, gol... 29 8.3
AF248953-1|AAF65550.1| 990|Homo sapiens golgi matrix protein GM... 29 8.3
>CR541830-1|CAG46629.1| 270|Homo sapiens VDRIP protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>CR457276-1|CAG33557.1| 270|Homo sapiens VDRIP protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AL158196-4|CAI17020.1| 270|Homo sapiens mediator of RNA polymerase
II transcription, subunit 4 homolog (S. cerevisiae)
protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AL158196-3|CAI17019.1| 238|Homo sapiens mediator of RNA polymerase
II transcription, subunit 4 homolog (S. cerevisiae)
protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 21 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 80
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 81 RDSDIQQLQKQLKE 94
>AK223017-1|BAD96737.1| 270|Homo sapiens mediator of RNA polymerase
II transcription, subunit 4 homolog protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AK222713-1|BAD96433.1| 270|Homo sapiens mediator of RNA polymerase
II transcription, subunit 4 homolog protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AK001934-1|BAA91987.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ11072 fis, clone PLACE1004982. ).
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AF300618-1|AAG22542.1| 270|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP36
protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AF230381-1|AAF37289.1| 270|Homo sapiens p36 TRAP/SMCC/PC2 subunit
protein.
Length = 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 EIIEVSIAPKPQKV-SAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDS 432
E+IE+ + QK+ A + Q+ +LL+ GE + + LA Q KI +M L+ EV+
Sbjct: 43 ELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEK 102
Query: 433 KDQDIYHLQRQLKD 474
+D DI LQ+QLK+
Sbjct: 103 RDSDIQQLQKQLKE 116
>AL158196-2|CAI17018.1| 224|Homo sapiens mediator of RNA polymerase
II transcription, subunit 4 homolog (S. cerevisiae)
protein.
Length = 224
Score = 50.0 bits (114), Expect = 4e-06
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +1
Query: 268 VSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSKDQDI 447
++I+ + + A + Q+ +LL+ GE + + LA Q KI +M L+ EV+ +D DI
Sbjct: 2 LAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEKRDSDI 61
Query: 448 YHLQRQLKD 474
LQ+QLK+
Sbjct: 62 QQLQKQLKE 70
>BC070091-1|AAH70091.1| 366|Homo sapiens CARD9 protein protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E +E+ +KV+ + A++ +++ GE T L E K+Q+K+ +L A + SK
Sbjct: 81 ESLELYYPQLYKKVTGKEPARVFSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSK 140
Query: 436 DQDIYHLQ 459
D I L+
Sbjct: 141 DDFIKELR 148
>BC008877-1|AAH08877.1| 492|Homo sapiens CARD9 protein protein.
Length = 492
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E +E+ +KV+ + A++ +++ GE T L E K+Q+K+ +L A + SK
Sbjct: 81 ESLELYYPQLYKKVTGKEPARVFSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSK 140
Query: 436 DQDIYHLQ 459
D I L+
Sbjct: 141 DDFIKELR 148
>AL592301-4|CAI13932.1| 536|Homo sapiens caspase recruitment domain
family, member 9 protein.
Length = 536
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E +E+ +KV+ + A++ +++ GE T L E K+Q+K+ +L A + SK
Sbjct: 81 ESLELYYPQLYKKVTGKEPARVFSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSK 140
Query: 436 DQDIYHLQ 459
D I L+
Sbjct: 141 DDFIKELR 148
>AL592301-3|CAI13931.1| 492|Homo sapiens caspase recruitment domain
family, member 9 protein.
Length = 492
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E +E+ +KV+ + A++ +++ GE T L E K+Q+K+ +L A + SK
Sbjct: 81 ESLELYYPQLYKKVTGKEPARVFSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSK 140
Query: 436 DQDIYHLQ 459
D I L+
Sbjct: 141 DDFIKELR 148
>AK024001-1|BAB14766.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ13939 fis, clone Y79AA1000827. ).
Length = 366
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E +E+ +KV+ + A++ +++ GE T L E K+Q+K+ +L A + SK
Sbjct: 81 ESLELYYPQLYKKVTGKEPARVFSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSK 140
Query: 436 DQDIYHLQ 459
D I L+
Sbjct: 141 DDFIKELR 148
>AF311287-1|AAG28790.1| 536|Homo sapiens caspase recruitment domain
protein 9 protein.
Length = 536
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E +E+ +KV+ + A++ +++ GE T L E K+Q+K+ +L A + SK
Sbjct: 81 ESLELYYPQLYKKVTGKEPARVFSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSK 140
Query: 436 DQDIYHLQ 459
D I L+
Sbjct: 141 DDFIKELR 148
>X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin C precursor. ).
Length = 572
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin A precursor. ).
Length = 702
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C
mRNA, complete cds. ).
Length = 572
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.12 protein.
Length = 487
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein.
Length = 465
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 211 RSLIGTNR*YRTYC*EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAK 390
RSL N R E EV ++ + + AA A+L D + + L E +K
Sbjct: 50 RSLETENAGLRLRITESEEV-VSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSK 108
Query: 391 IQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++++ ELKA K+ D+ Q +LKD
Sbjct: 109 VREEFKELKARNTKKEGDLIAAQARLKD 136
>AY354204-1|AAQ63889.2| 972|Homo sapiens retinoic acid induced 14
isoform protein.
Length = 972
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 298 SAADHAQLTDLLLSEHGELI--QTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
S A+ QL L S EL+ ++++ + + QK+ E +++ + +++ +Q+Q+K
Sbjct: 440 SEAERKQLQVELQSRRAELVCLNNTEISENSSDLSQKLKETQSQYEEAMKEVLSVQKQMK 499
>BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 14
protein.
Length = 980
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 298 SAADHAQLTDLLLSEHGELI--QTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
S A+ QL L S EL+ ++++ + + QK+ E +++ + +++ +Q+Q+K
Sbjct: 448 SEAERKQLQVELQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMK 507
>AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein.
Length = 983
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 298 SAADHAQLTDLLLSEHGELI--QTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
S A+ QL L S EL+ ++++ + + QK+ E +++ + +++ +Q+Q+K
Sbjct: 451 SEAERKQLQVELQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMK 510
>AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment
epithelial cell protein protein.
Length = 980
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 298 SAADHAQLTDLLLSEHGELI--QTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
S A+ QL L S EL+ ++++ + + QK+ E +++ + +++ +Q+Q+K
Sbjct: 448 SEAERKQLQVELQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMK 507
>AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein.
Length = 989
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 298 SAADHAQLTDLLLSEHGELI--QTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 471
S A+ QL L S EL+ ++++ + + QK+ E +++ + +++ +Q+Q+K
Sbjct: 457 SEAERKQLQVELQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMK 516
>L06147-1|AAA35920.1| 620|Homo sapiens golgin-95 protein.
Length = 620
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 197 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 229
>BT007248-1|AAP35912.1| 345|Homo sapiens golgi autoantigen, golgin
subfamily a, 2 protein.
Length = 345
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 52 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 84
>BC069268-1|AAH69268.1| 990|Homo sapiens golgi autoantigen, golgin
subfamily a, 2 protein.
Length = 990
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 567 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 599
>BC014188-1|AAH14188.2| 678|Homo sapiens GOLGA2 protein protein.
Length = 678
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 255 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 287
>AL590708-22|CAI13841.1| 990|Homo sapiens golgi autoantigen, golgin
subfamily a, 2 protein.
Length = 990
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 567 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 599
>AL590708-21|CAI13842.1| 952|Homo sapiens golgi autoantigen, golgin
subfamily a, 2 protein.
Length = 952
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 529 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 561
>AF248953-1|AAF65550.1| 990|Homo sapiens golgi matrix protein GM130
protein.
Length = 990
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 367 DLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQ 465
+L + ++Q+K++ELK V+ K Q+ LQ+Q
Sbjct: 567 ELGKKLGELQEKLSELKETVELKSQEAQSLQQQ 599
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,053,252
Number of Sequences: 237096
Number of extensions: 1130170
Number of successful extensions: 2718
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2718
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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