Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31005X
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical ... 29 1.7
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 28 4.0
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 28 4.0
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 28 4.0
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical p... 27 7.0
U80030-4|AAG24162.2| 370|Caenorhabditis elegans Serpentine rece... 27 7.0
U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical pr... 27 7.0
>AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical
protein W09G10.6 protein.
Length = 621
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 262 IEVSIAPKPQKVSAADH----AQLTDLLLSEHGELIQ--TLDLADEQAKIQQKMNELKAE 423
++ S A K QK S+ +Q +DL S Q + +L +++ QK+N+LK+
Sbjct: 215 LQGSQASKDQKASSGAFKSLLSQSSDLTASSSNLTAQLTSTNLGGSGSELSQKLNDLKSN 274
Query: 424 VDSKDQ 441
DS DQ
Sbjct: 275 SDSSDQ 280
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 388 KIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++Q+ M K E+ +KDQ + HL+ QL +
Sbjct: 770 EVQELMQRHKWEITNKDQTLKHLETQLDE 798
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 388 KIQQKMNELKAEVDSKDQDIYHLQRQLKD 474
++Q+ M K E+ +KDQ + HL+ QL +
Sbjct: 770 EVQELMQRHKWEITNKDQTLKHLETQLDE 798
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/72 (25%), Positives = 39/72 (54%)
Frame = +1
Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
E+ +V + +++ + A++T+ + S + +L L+ DE A++ + + K E +
Sbjct: 272 ELSDVRLELGSTRLAMKEKAEVTEAVTSFNKDLRDKLE--DEIARLGECLQFRKDEHEQD 329
Query: 436 DQDIYHLQRQLK 471
+ I HL+ QLK
Sbjct: 330 EAVIAHLEEQLK 341
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +2
Query: 116 SSSYDIRK*YISFILKKAVKLYRAMAS-HLST 208
+++Y +RK YIS +LKK + + ++++ HLST
Sbjct: 71 NTTYRVRKQYISRLLKKDAQYFDSVSTGHLST 102
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +2
Query: 116 SSSYDIRK*YISFILKKAVKLYRAMAS-HLST 208
+++Y +RK YIS +LKK + + ++++ HLST
Sbjct: 130 NTTYRVRKQYISRLLKKDAQYFDSVSTGHLST 161
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 283 KPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVD 429
K + AAD A+++ L E++QT+D I+ +NE+K +V+
Sbjct: 290 KSKTTVAADVAKMSGALQKAEEEVVQTID--QTVKNIKSNVNEVKKDVE 336
>Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.1 bits (57), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 306 CSGHFLWFWCYGN 268
C GH +W WC+ N
Sbjct: 28 CQGHNIWGWCFHN 40
>Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.1 bits (57), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 306 CSGHFLWFWCYGN 268
C GH +W WC+ N
Sbjct: 28 CQGHNIWGWCFHN 40
>U80030-4|AAG24162.2| 370|Caenorhabditis elegans Serpentine
receptor, class w protein120 protein.
Length = 370
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 78 CIKNATMYVVTTFNVYSKNNNIV 10
C +N T Y+VT +++ KNN +
Sbjct: 194 CAQNGTYYIVTMSDLFMKNNGFL 216
>U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical
protein F19C7.3 protein.
Length = 310
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 219 KRSLVLKCDAIALYSLTAFFNINDMYYFLISYEL 118
+ L KCD + L +F + DMY+ L ++ L
Sbjct: 127 RHPLFRKCDYVELVGRNSFLSNEDMYFVLKNFNL 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,069,436
Number of Sequences: 27780
Number of extensions: 188439
Number of successful extensions: 588
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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