Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31005X
         (476 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g45160.1 68414.m05177 protein kinase family protein contains ...    31   0.31 
At1g63590.1 68414.m07188 receptor-like protein kinase-related co...    29   1.6  
At3g13790.1 68416.m01742 beta-fructosidase (BFRUCT1) / beta-fruc...    27   5.0  
At2g40620.1 68415.m05010 bZIP transcription factor family protei...    27   5.0  
At1g65985.1 68414.m07487 expressed protein contains Pfam profile...    27   6.6  
At5g03400.1 68418.m00293 hypothetical protein                          27   8.7  

>At1g45160.1 68414.m05177 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 1067

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 15/66 (22%), Positives = 34/66 (51%)
 Frame = +1

Query: 256 EIIEVSIAPKPQKVSAADHAQLTDLLLSEHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
           +I+   + P    ++   H +LTD  LS+ G +  T+DL+  ++ +  + N    + + +
Sbjct: 788 KIVHRDLKPDNLLIAYNGHIKLTDFGLSKIGLINNTIDLSGHESDVSPRTNSHHFQKNQE 847

Query: 436 DQDIYH 453
           ++ I H
Sbjct: 848 EERIRH 853


>At1g63590.1 68414.m07188 receptor-like protein kinase-related
           contains Pfam PF01657: Domain of unknown function;
           similar to receptor-like protein kinase 4 (GI:13506745)
           {Arabidopsis thaliana}
          Length = 268

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -3

Query: 135 LISYELDKRPPNAATLGISCIKNATMYVV 49
           LI+YE+    PN  +LG++  ++ T+Y++
Sbjct: 240 LITYEISALQPNVTSLGVTKSESLTVYII 268


>At3g13790.1 68416.m01742 beta-fructosidase (BFRUCT1) /
           beta-fructofuranosidase / cell wall invertase identical
           to beta-fructofuranosidase GI:402740 from [Arabidopsis
           thaliana]
          Length = 584

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 25  FTVNIECSYHVHSSVFDTRNPKSRSV 102
           + VN+E S+HV+  +  + N KS SV
Sbjct: 22  YVVNLEASHHVYKRLTQSTNTKSPSV 47


>At2g40620.1 68415.m05010 bZIP transcription factor family protein
           identical to b-Zip DNA binding protein GI:2246376 from
           [Arabidopsis thaliana]; contains a bZIP transcription
           factor basic domain signature (PDOC00036)
          Length = 367

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +1

Query: 331 LLSEHGELIQTLDLADEQAKIQQKMNE-LKAEVD 429
           L SE+ EL   L + ++QAK++  +NE LK EV+
Sbjct: 204 LSSENTELKLRLQVMEQQAKLRDALNEQLKKEVE 237


>At1g65985.1 68414.m07487 expressed protein contains Pfam profile
           PF03140: Plant protein of unknown function
          Length = 456

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 213 SLVLKCDAIALYSLTAFFNINDMYYFLISYELDKRPPNAATL 88
           S +L+C  + +     F ++ DMY  +    LD  PP   +L
Sbjct: 190 SFILRCFGLKIEEKKNFMHLTDMYRCVYKESLDYIPPREYSL 231


>At5g03400.1 68418.m00293 hypothetical protein 
          Length = 170

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 340 EHGELIQTLDLADEQAKIQQKMNELKAEVDSK 435
           E  EL + L + DE+ +I  K  E+K EVD +
Sbjct: 20  EDSELERALMIIDEEMEIWAKKKEVKDEVDDE 51


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,286,061
Number of Sequences: 28952
Number of extensions: 167197
Number of successful extensions: 440
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)