Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31004
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.4  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 31 MKNQSHWLCC 2
          M N+++WLCC
Sbjct: 1  MANKTYWLCC 10


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 31 MKNQSHWLCC 2
          M N+++WLCC
Sbjct: 1  MANKTYWLCC 10


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/40 (22%), Positives = 25/40 (62%)
 Frame = -1

Query: 509 IPSSQMYYI*IQTPIATSISFVN*INCICNFTPLLYSDLE 390
           + + ++Y++ +  PI ++++FV  +  +C+   + YS +E
Sbjct: 549 VQAGELYFMSLLNPILSNVTFVIDVVYVCD---VCYSTIE 585


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/40 (22%), Positives = 25/40 (62%)
 Frame = -1

Query: 509 IPSSQMYYI*IQTPIATSISFVN*INCICNFTPLLYSDLE 390
           + + ++Y++ +  PI ++++FV  +  +C+   + YS +E
Sbjct: 274 VQAGELYFMSLLNPILSNVTFVIDVVYVCD---VCYSTIE 310


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 683 QCLDNSVFLEHNCNFSNPNYN 621
           QCLD S   E N   SN N+N
Sbjct: 308 QCLDLSKTKETNLEKSNLNHN 328


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 683 QCLDNSVFLEHNCNFSNPNYN 621
           QCLD S   E N   SN N+N
Sbjct: 200 QCLDLSKTKETNLEKSNLNHN 220


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 169 PRQLDIHRVRPHRHHYRKIFHQAY 98
           PR +D    R  RH + KI+   Y
Sbjct: 24  PRSIDEKIKRQERHSFYKIYKYTY 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,181
Number of Sequences: 336
Number of extensions: 3652
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)