Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31004
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001595-1|AAN71350.1|  559|Drosophila melanogaster RE28319p pro...    29   6.4  
AE014298-364|AAF45754.2|  186|Drosophila melanogaster CG14052-PA...    29   6.4  
AE014297-4385|AAF56899.2|  515|Drosophila melanogaster CG2010-PA...    29   6.4  

>BT001595-1|AAN71350.1|  559|Drosophila melanogaster RE28319p
           protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = -3

Query: 201 WGQVRVGNTSAHGSLISTGSAPTDTTTVKFSTK---HILMMWMH--LCVMRRCCKMWR 43
           WGQ+ V  +  + S  +  S   DTT  K   K   HI     H  +C + R C+ WR
Sbjct: 52  WGQLAVEASQVYLSDGTVRSPFADTTIEKLPDKVLLHIFSYLSHREICRLARICRRWR 109


>AE014298-364|AAF45754.2|  186|Drosophila melanogaster CG14052-PA
           protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 178 HQRPRQLDIHRVRPHRHHYRKIFHQAYPDDVD 83
           H+  R + IH+ + H HH+ K  H  + D  D
Sbjct: 98  HEDHRPIQIHQTKEHIHHHEKHDHHDHHDHHD 129


>AE014297-4385|AAF56899.2|  515|Drosophila melanogaster CG2010-PA,
           isoform A protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = -3

Query: 201 WGQVRVGNTSAHGSLISTGSAPTDTTTVKFSTK---HILMMWMH--LCVMRRCCKMWR 43
           WGQ+ V  +  + S  +  S   DTT  K   K   HI     H  +C + R C+ WR
Sbjct: 8   WGQLAVEASQVYLSDGTVRSPFADTTIEKLPDKVLLHIFSYLSHREICRLARICRRWR 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,873,362
Number of Sequences: 53049
Number of extensions: 584223
Number of successful extensions: 2218
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2216
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)