Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31003
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 120 8e-28
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 31 0.87
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 29 2.0
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 28 4.6
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 4.6
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 6.1
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 6.1
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 6.1
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 28 6.1
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 28 6.1
AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical ... 28 6.1
AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical ... 28 6.1
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z29121-1|CAA82387.3| 324|Caenorhabditis elegans Hypothetical pr... 27 8.1
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 120 bits (289), Expect = 8e-28
Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Frame = +2
Query: 245 KGYAHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRV 424
KG K YHG+TGR++NVT A+G+IVNKRVRG I+PKRINIR+EH+K SKCR DFL RV
Sbjct: 50 KGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRV 109
Query: 425 KENERLLKEAKAAGKTV-NLKRQPAPPK-APTSSVELRNPSYL 547
K N+ K AK+AG+ V LKR P P+ A T + + P L
Sbjct: 110 KSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELL 152
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = +3
Query: 99 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMHTK 263
MTNSKG RRGTR +FAR FR HG LSTY YK GD+VDI+ NGA QKGM K
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFK 55
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 30.7 bits (66), Expect = 0.87
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 226 EAMVQFKRVCTQSIPWKDRSRVQRDCSCSRCDCQQACSR 342
E V+ KRV T S PW S Q DCSC C S+
Sbjct: 158 EKSVKMKRVWTGSTPW---SPFQLDCSCLTVTCDGFSSK 193
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +2
Query: 410 FLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAPTSSVELR 532
+L +K +++++ A+A G V++K P PP+A T+S L+
Sbjct: 494 YLVEMKGFDKMIQAAQA-GLPVSIKATPIPPQAQTASTTLQ 533
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 281
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 281
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 386 KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAPT 514
+H C + + K+ K++ RL ++A+ + + + R + P+APT
Sbjct: 620 QHQDCHEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPT 662
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 362 INIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAPTSSVELRNPS 541
+ RVE + K + F + E ER EA +G+ + ++P PPK P E P
Sbjct: 825 LEARVEEIPE-KATKSFRELDNELERC--EAVHSGEKIKKVKEPKPPKQPKEKKEKPPPK 881
Query: 542 YLRLS 556
+S
Sbjct: 882 KKEMS 886
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 362 INIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAPTSSVELRNPS 541
+ RVE + K + F + E ER EA +G+ + ++P PPK P E P
Sbjct: 838 LEARVEEIPE-KATKSFRELDNELERC--EAVHSGEKIKKVKEPKPPKQPKEKKEKPPPK 894
Query: 542 YLRLS 556
+S
Sbjct: 895 KKEMS 899
>Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical
protein D1086.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 256 TQSIPW--KDRSRVQRDCSCSRCDCQQACSRKDYTEA 360
T+ + W D+SR+ D C++ ++ C KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -2
Query: 361 ALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVCIPF*TAPLPLMSTMSPTLYT-FMY 185
A RY ++ LV H S H VHAT S + PF + P + T S + T F+
Sbjct: 686 ANRYRSASTGLV--HLPSRH-HSVHATKSSAASLLTTPFVSKPQGITPTPSSSSSTSFVQ 742
Query: 184 VESGIVPCVRNLRANKSLV 128
VR++R +++V
Sbjct: 743 FTPNTYSAVRSIRPRQAIV 761
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -2
Query: 361 ALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVCIPF*TAPLPLMSTMSPTLYT-FMY 185
A RY ++ LV H S H VHAT S + PF + P + T S + T F+
Sbjct: 686 ANRYRSASTGLV--HLPSRH-HSVHATKSSAASLLTTPFVSKPQGITPTPSSSSSTSFVQ 742
Query: 184 VESGIVPCVRNLRANKSLV 128
VR++R +++V
Sbjct: 743 FTPNTYSAVRSIRPRQAIV 761
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +1
Query: 292 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 471
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 472 RQPEETAS 495
Q S
Sbjct: 92 CQSAPAVS 99
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +1
Query: 292 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 471
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 472 RQPEETAS 495
Q S
Sbjct: 92 CQSAPAVS 99
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 416 KRVKENERLLKEAKAAGKTVNLKRQPAPPKAPTSSVELRNPSYLRLSH 559
+R KE +RL K+A K+ N R + +P S+ ++P+YL L H
Sbjct: 231 RRAKE-KRLKKDAGRRWKSSN--RAESDSNSPIESINGQSPNYLYLDH 275
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 416 KRVKENERLLKEAKAAGKTVNLKRQPAPPKAPTSSVELRNPSYLRLSH 559
+R KE +RL K+A K+ N R + +P S+ ++P+YL L H
Sbjct: 231 RRAKE-KRLKKDAGRRWKSSN--RAESDSNSPIESINGQSPNYLYLDH 275
>AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical
protein F25E5.6a protein.
Length = 285
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +2
Query: 191 ESVQSWRHCRHQRQWCSSKGYAHKVYHGKTGRVYNVTAHALGVIVN--KRVRGRIIPKRI 364
ES ++++H + + K H + +T + + +V+ + ++ R+
Sbjct: 95 ESAKNYKHLKKLKNQYCQKDSEHSMEKKQTINSIDAIETKMQKLVDALSYLEIKLRKFRL 154
Query: 365 NIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAP 511
+ H C ++FL + EN+ L + LK QPAPPK P
Sbjct: 155 SAYNPHWSTIPCLEEFL--LLENKICLADKSGPMPGWPLKTQPAPPKIP 201
>AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical
protein F25E5.6b protein.
Length = 406
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +2
Query: 191 ESVQSWRHCRHQRQWCSSKGYAHKVYHGKTGRVYNVTAHALGVIVN--KRVRGRIIPKRI 364
ES ++++H + + K H + +T + + +V+ + ++ R+
Sbjct: 95 ESAKNYKHLKKLKNQYCQKDSEHSMEKKQTINSIDAIETKMQKLVDALSYLEIKLRKFRL 154
Query: 365 NIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAP 511
+ H C ++FL + EN+ L + LK QPAPPK P
Sbjct: 155 SAYNPHWSTIPCLEEFL--LLENKICLADKSGPMPGWPLKTQPAPPKIP 201
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 292 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 387
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 292 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 387
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z29121-1|CAA82387.3| 324|Caenorhabditis elegans Hypothetical
protein ZK757.1 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 292 VHATCLSMVYFVCIPF*TAPLPLMSTMSPTLY 197
VH TC+ F+CI F P L+ T PT++
Sbjct: 28 VHGTCVVFNLFLCIFFICRP-HLLRTFKPTIF 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,589,949
Number of Sequences: 27780
Number of extensions: 282431
Number of successful extensions: 1038
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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