Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31000
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.3  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 504 FFFFF*LKYVYSLCFNS 454
           F+F+F LK V  LC+++
Sbjct: 137 FYFWFVLKQVMFLCYST 153


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 183 TKHILSQDIKNNVD 224
           TK  L Q IKNN+D
Sbjct: 353 TKDALLQAIKNNID 366


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 290 D*SGSEACRHGGQWIG 243
           D SGS    +G QW+G
Sbjct: 473 DESGSPYMVYGDQWVG 488


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 504 FFFFF*LKYVYSLCFNSISTFFR 436
           + +FF L Y+Y+     +S  F+
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIFK 107


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 504 FFFFF*LKYVYSLCFNSISTFFR 436
           + +FF L Y+Y+     +S  F+
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIFK 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,817
Number of Sequences: 336
Number of extensions: 2176
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)