Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31000
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450 pr...    26   0.63 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   0.83 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   3.4  

>AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 243 ANPLAAVTAGFASRSILHRSGDLGPEPQSIS 335
           A PL      + S   LHRSGD  PEP+  S
Sbjct: 50  AIPLKVGDKLYVSVWALHRSGDYYPEPERFS 80


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 0.83
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 65   ARIENVSEDERSTTIDVGHHQDVGENTPNQAE 160
            A +EN  EDE +  ++     +V  N  NQ E
Sbjct: 1323 ANVENQREDEVAANVENAKENEVAANVENQNE 1354


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 128 DVGENTPNQAEQAGFRSCNEAH 193
           D+GEN+ +  E+ GFR  N  +
Sbjct: 493 DLGENSISVIEEPGFRGMNNLY 514


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,485
Number of Sequences: 2352
Number of extensions: 9774
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)