Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31000
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040126-1|AAH40126.1| 659|Homo sapiens TRM1 tRNA methyltransfe... 73 4e-13
BC018302-1|AAH18302.1| 630|Homo sapiens TRMT1 protein protein. 73 4e-13
BC002492-1|AAH02492.1| 659|Homo sapiens TRM1 tRNA methyltransfe... 73 4e-13
AK000251-1|BAA91031.1| 659|Homo sapiens protein ( Homo sapiens ... 73 4e-13
AF196479-1|AAG28495.1| 659|Homo sapiens N2,N2-dimethylguanosine... 73 4e-13
AC005546-2|AAC33150.1| 656|Homo sapiens R29425_1 protein. 60 4e-09
BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein. 32 1.3
BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein. 32 1.3
AB051465-1|BAB21769.1| 1302|Homo sapiens KIAA1678 protein protein. 32 1.3
AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein. 30 4.0
BC109114-1|AAI09115.1| 950|Homo sapiens ADAM metallopeptidase w... 29 7.0
AJ315733-1|CAC86014.1| 950|Homo sapiens metalloprotease disinte... 29 7.0
>BC040126-1|AAH40126.1| 659|Homo sapiens TRM1 tRNA
methyltransferase 1 homolog (S. cerevisiae) protein.
Length = 659
Score = 73.3 bits (172), Expect = 4e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 3 TMPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPV 182
T +L +RSA+++A ++VS SHA K +VKT+AP +WDI+R WEK P+K+ +L
Sbjct: 459 TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSP 518
Query: 183 TKHILSQDIKNNVDLSVNELANP 251
ILS + + + ++ E ANP
Sbjct: 519 AFRILSVEPRLQANFTIREDANP 541
>BC018302-1|AAH18302.1| 630|Homo sapiens TRMT1 protein protein.
Length = 630
Score = 73.3 bits (172), Expect = 4e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 3 TMPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPV 182
T +L +RSA+++A ++VS SHA K +VKT+AP +WDI+R WEK P+K+ +L
Sbjct: 430 TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSP 489
Query: 183 TKHILSQDIKNNVDLSVNELANP 251
ILS + + + ++ E ANP
Sbjct: 490 AFRILSVEPRLQANFTIREDANP 512
>BC002492-1|AAH02492.1| 659|Homo sapiens TRM1 tRNA
methyltransferase 1 homolog (S. cerevisiae) protein.
Length = 659
Score = 73.3 bits (172), Expect = 4e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 3 TMPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPV 182
T +L +RSA+++A ++VS SHA K +VKT+AP +WDI+R WEK P+K+ +L
Sbjct: 459 TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSP 518
Query: 183 TKHILSQDIKNNVDLSVNELANP 251
ILS + + + ++ E ANP
Sbjct: 519 AFRILSVEPRLQANFTIREDANP 541
>AK000251-1|BAA91031.1| 659|Homo sapiens protein ( Homo sapiens
cDNA FLJ20244 fis, clone COLF6450. ).
Length = 659
Score = 73.3 bits (172), Expect = 4e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 3 TMPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPV 182
T +L +RSA+++A ++VS SHA K +VKT+AP +WDI+R WEK P+K+ +L
Sbjct: 459 TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSP 518
Query: 183 TKHILSQDIKNNVDLSVNELANP 251
ILS + + + ++ E ANP
Sbjct: 519 AFRILSVEPRLQANFTIREDANP 541
>AF196479-1|AAG28495.1| 659|Homo sapiens N2,N2-dimethylguanosine
tRNA methyltransferase protein.
Length = 659
Score = 73.3 bits (172), Expect = 4e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 3 TMPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPV 182
T +L +RSA+++A ++VS SHA K +VKT+AP +WDI+R WEK P+K+ +L
Sbjct: 459 TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSP 518
Query: 183 TKHILSQDIKNNVDLSVNELANP 251
ILS + + + ++ E ANP
Sbjct: 519 AFRILSVEPRLQANFTIREDANP 541
>AC005546-2|AAC33150.1| 656|Homo sapiens R29425_1 protein.
Length = 656
Score = 60.1 bits (139), Expect = 4e-09
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 3 TMPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPV 182
T +L +RSA+++A ++VS SHA K +VKT+AP +WDI+ +K P+K+ +L
Sbjct: 459 TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIM---QKECPVKRERLSETSP 515
Query: 183 TKHILSQDIKNNVDLSVNELANP 251
ILS + + + ++ E ANP
Sbjct: 516 AFRILSVEPRLQANFTIREDANP 538
>BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +3
Query: 63 SHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPVTKHILSQDIKNNVDLSVNEL 242
S S +V+ + PP+L +I R ++ HP + KL++ V + + +D+ ++V+L NE+
Sbjct: 985 SQGSGTAVRKHKPPRLS-EIKRKTDE-HPELKEKLMNRVVDESMNLEDVPDSVNLFANEV 1042
Query: 243 ANPLAAVT 266
A + +T
Sbjct: 1043 AAKIMNLT 1050
>BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +3
Query: 63 SHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPVTKHILSQDIKNNVDLSVNEL 242
S S +V+ + PP+L +I R ++ HP + KL++ V + + +D+ ++V+L NE+
Sbjct: 985 SQGSGTAVRKHKPPRLS-EIKRKTDE-HPELKEKLMNRVVDESMNLEDVPDSVNLFANEV 1042
Query: 243 ANPLAAVT 266
A + +T
Sbjct: 1043 AAKIMNLT 1050
>AB051465-1|BAB21769.1| 1302|Homo sapiens KIAA1678 protein protein.
Length = 1302
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +3
Query: 63 SHASKMSVKTNAPPQLMWDIIRTWEKTHPIKQSKLVSDPVTKHILSQDIKNNVDLSVNEL 242
S S +V+ + PP+L +I R ++ HP + KL++ V + + +D+ ++V+L NE+
Sbjct: 616 SQGSGTAVRKHKPPRLS-EIKRKTDE-HPELKEKLMNRVVDESMNLEDVPDSVNLFANEV 673
Query: 243 ANPLAAVT 266
A + +T
Sbjct: 674 AAKIMNLT 681
>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
Length = 5058
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -2
Query: 288 LIWKRSLPSRRPVDWLAHSPTNRHYSLYP---EIVCASLQDL 172
L+ + S R +D + HSP Y+LYP E++ A+L DL
Sbjct: 2415 LVRECSTEMARLLDTILHSPNKDFYALYPTLQEVILANLTDL 2456
>BC109114-1|AAI09115.1| 950|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 15 protein.
Length = 950
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 228 SVNELANPLAAVTAGFASRSILHRSGDLGPEPQSISATTKCRSL 359
S L PL +T G + SGD+ EP S +A + C L
Sbjct: 80 STEHLGVPLQGLTGGSSDLRRCFYSGDVNAEPDSFAAVSLCGGL 123
>AJ315733-1|CAC86014.1| 950|Homo sapiens metalloprotease
disintegrin 15 with thrombospondin domains protein.
Length = 950
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 228 SVNELANPLAAVTAGFASRSILHRSGDLGPEPQSISATTKCRSL 359
S L PL +T G + SGD+ EP S +A + C L
Sbjct: 80 STEHLGVPLQGLTGGSSDLRRCFYSGDVNAEPDSFAAVSLCGGL 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,063,550
Number of Sequences: 237096
Number of extensions: 1327705
Number of successful extensions: 3380
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3379
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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