Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31000
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77136-4|CAB00881.1| 526|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AF059608-1|AAD13737.1| 526|Caenorhabditis elegans N2,N2-dimethy... 65 2e-11
U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical pr... 30 0.83
U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical pr... 30 0.83
U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical pr... 30 0.83
U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical pr... 30 0.83
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 28 4.4
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 28 4.4
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z69360-6|CAA93282.1| 599|Caenorhabditis elegans Hypothetical pr... 27 7.7
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z77136-4|CAB00881.1| 526|Caenorhabditis elegans Hypothetical
protein ZC376.5 protein.
Length = 526
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 MRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEK-THPIKQSKLVSDPVTKHIL 197
+RSAI+NAG+KVS SH + ++KTNAP L+WDI R K T ++ +L + HIL
Sbjct: 407 VRSAILNAGFKVSGSHCNPRAIKTNAPMHLLWDIYRQVAKDTSVDREKRLAKESAGYHIL 466
Query: 198 SQDIKNNVDLSVN 236
Q I N V+ +++
Sbjct: 467 GQPITNTVNFTLH 479
>AF059608-1|AAD13737.1| 526|Caenorhabditis elegans
N2,N2-dimethylguanosine tRNA methyltransferase protein.
Length = 526
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 MRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDIIRTWEK-THPIKQSKLVSDPVTKHIL 197
+RSAI+NAG+KVS SH + ++KTNAP L+WDI R K T ++ +L + HIL
Sbjct: 407 VRSAILNAGFKVSGSHCNPRAIKTNAPMHLLWDIYRQVAKDTSVDREKRLAKESAGYHIL 466
Query: 198 SQDIKNNVDLSVN 236
Q I N V+ +++
Sbjct: 467 GQPITNTVNFTLH 479
>U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical
protein R11G1.6c protein.
Length = 811
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 174 DPVTKHILSQDIKNNVDLSVNELANPLAAVTAGFASRSILHRSGDLGPEPQ 326
DP T+ IL + KN+ D EL L +V ++ S L R G Q
Sbjct: 520 DPATQKILDRQFKNHNDPKTRELEAKLQSVAQSMSASSTLDRPSKNGNNGQ 570
>U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical
protein R11G1.6d protein.
Length = 809
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 174 DPVTKHILSQDIKNNVDLSVNELANPLAAVTAGFASRSILHRSGDLGPEPQ 326
DP T+ IL + KN+ D EL L +V ++ S L R G Q
Sbjct: 520 DPATQKILDRQFKNHNDPKTRELEAKLQSVAQSMSASSTLDRPSKNGNNGQ 570
>U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical
protein R11G1.6b protein.
Length = 901
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 174 DPVTKHILSQDIKNNVDLSVNELANPLAAVTAGFASRSILHRSGDLGPEPQ 326
DP T+ IL + KN+ D EL L +V ++ S L R G Q
Sbjct: 610 DPATQKILDRQFKNHNDPKTRELEAKLQSVAQSMSASSTLDRPSKNGNNGQ 660
>U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical
protein R11G1.6a protein.
Length = 899
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 174 DPVTKHILSQDIKNNVDLSVNELANPLAAVTAGFASRSILHRSGDLGPEPQ 326
DP T+ IL + KN+ D EL L +V ++ S L R G Q
Sbjct: 610 DPATQKILDRQFKNHNDPKTRELEAKLQSVAQSMSASSTLDRPSKNGNNGQ 660
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 6 MPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDI 122
MPM MR A A V Y H + + +K PP ++DI
Sbjct: 415 MPM--MRPASAMAAPSVDYMHRNTLPLKPQPPPPQVYDI 451
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 6 MPMLIMRSAIINAGYKVSYSHASKMSVKTNAPPQLMWDI 122
MPM MR A A V Y H + + +K PP ++DI
Sbjct: 314 MPM--MRPASAMAAPSVDYMHRNTLPLKPQPPPPQVYDI 350
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 27.5 bits (58), Expect = 5.8
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -1
Query: 331 IDCGSGPRSPERCRIDLEAKPAVTAASGLASSFTDKSTLFFIS*DSMC-FVTGS-ET--S 164
+ CG+ S CR LE + LAS F D+ T F D +C F++ S ET +
Sbjct: 402 VACGTSYHSAIACRQILEELSELPVVVELASDFLDRETPIFR--DDVCLFISQSGETADT 459
Query: 163 LLCLIGCVFSHVLMMSHINCGGAFV 89
LL L C L + N G+ +
Sbjct: 460 LLALRYCKPRGALTIGVTNTVGSSI 484
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 27.5 bits (58), Expect = 5.8
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -1
Query: 331 IDCGSGPRSPERCRIDLEAKPAVTAASGLASSFTDKSTLFFIS*DSMC-FVTGS-ET--S 164
+ CG+ S CR LE + LAS F D+ T F D +C F++ S ET +
Sbjct: 415 VACGTSYHSAIACRQILEELSELPVVVELASDFLDRETPIFR--DDVCLFISQSGETADT 472
Query: 163 LLCLIGCVFSHVLMMSHINCGGAFV 89
LL L C L + N G+ +
Sbjct: 473 LLALRYCKPRGALTIGVTNTVGSSI 497
>Z69360-6|CAA93282.1| 599|Caenorhabditis elegans Hypothetical
protein F25H8.6 protein.
Length = 599
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +3
Query: 279 SRSILHRSGDLGPE-----PQSISATTKCRSLLKIRTRTGRKKTMLKENIRIQVTMI 434
SR ILHR DLG + P++ + T+ S+ + +KK I +Q+ ++
Sbjct: 310 SRDILHRPSDLGTKMFFSSPRTFNLTSAFSSITPLEDHKFQKKIEDDHKIHMQIALM 366
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 421 CIRMFSFNIVFFLPVLVLIFNRLRHFV 341
CI + +IV FLP+LV R F+
Sbjct: 15 CITILVLSIVIFLPILVYFLPRYTQFI 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,524,961
Number of Sequences: 27780
Number of extensions: 204466
Number of successful extensions: 576
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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