Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30999x
         (484 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    34   0.062
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    34   0.062
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    34   0.062
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    34   0.062
Z70680-6|CAC42260.1|  318|Caenorhabditis elegans Hypothetical pr...    27   5.4  
U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine rece...    27   7.1  
AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical ...    27   9.4  
AC006649-2|AAF39864.2|  259|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
            F53B7.5b protein.
          Length = 2892

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 243  SKLTNGLPVPPLSSTMLPK*QKLPTCSMC--LPLIDIGAESVLL 368
            S  +NG+  PP +ST   K    P CS C   P++ +G  S  L
Sbjct: 1495 STASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYL 1538


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 243  SKLTNGLPVPPLSSTMLPK*QKLPTCSMC--LPLIDIGAESVLL 368
            S  +NG+  PP +ST   K    P CS C   P++ +G  S  L
Sbjct: 1495 STASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYL 1538


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
            protein F53B7.5b protein.
          Length = 2892

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 243  SKLTNGLPVPPLSSTMLPK*QKLPTCSMC--LPLIDIGAESVLL 368
            S  +NG+  PP +ST   K    P CS C   P++ +G  S  L
Sbjct: 1495 STASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYL 1538


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 243  SKLTNGLPVPPLSSTMLPK*QKLPTCSMC--LPLIDIGAESVLL 368
            S  +NG+  PP +ST   K    P CS C   P++ +G  S  L
Sbjct: 1495 STASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYL 1538


>Z70680-6|CAC42260.1|  318|Caenorhabditis elegans Hypothetical
           protein C25G4.11 protein.
          Length = 318

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 417 RGHRLC**HLPPSNQSAAAPIRLLCRSKGGTSS 319
           R HRLC  +LP          R+L   KGG SS
Sbjct: 264 RSHRLCLYYLPEIFSCLDRAYRMLSNEKGGVSS 296


>U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 16 protein.
          Length = 342

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 233 SSSTSFQLQQRVVAMIYPVYRHSNNLACSYF 141
           +S+T+F +  ++V +IY V   ++   CSYF
Sbjct: 12  NSATAFSVGYQIVYLIYVVLSVTSIFTCSYF 42


>AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical
           protein T05E7.1 protein.
          Length = 474

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +2

Query: 284 HNAAQVTEASHLLDVPPFDRHRSRIGAAAD--WLLGGKCHQQSR 409
           H  +++    H L  P F  H     A  +  W  GG+C+Q S+
Sbjct: 383 HVESELVPGGHFLYFPYFPHHGIIYNAQINMLWGFGGECYQHSK 426


>AC006649-2|AAF39864.2|  259|Caenorhabditis elegans Hypothetical
           protein H01M10.1 protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 228 GTPHWSKLTNGLPVPPLSSTMLP 296
           G P  S   NGLP PP+S   +P
Sbjct: 212 GLPRDSPFQNGLPNPPISMLKIP 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,094,272
Number of Sequences: 27780
Number of extensions: 232793
Number of successful extensions: 418
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)