Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30998
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 3.6
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 3.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 6.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 6.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 6.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.2
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 6.2
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 212 HEERASCSHHSNRPVRKEIK 271
HEE S H NR R +++
Sbjct: 381 HEENESVDKHPNRRARGQLR 400
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -1
Query: 233 NSSLVLRGSRSPGSDYGQHAVRGQPRFNSVRIAVF 129
N S ++ GS +PG+ + P F R+A +
Sbjct: 385 NRSGLVSGSSTPGTGREHDPAKFPPSFRISRVAAY 419
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 47
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 47
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 47
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 47
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 280
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 280
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 280
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 280
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 280
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 173 RRADRNRSQDSGCHEERASCSHHSNRPVRKE 265
RR ++ ++ EER SC +S R++
Sbjct: 239 RRYEKLHNEKEKLLEERTSCKRYSRSREREQ 269
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = -1
Query: 413 NINTIKRSVSQARTRNANKINTRYTFLIHSD 321
N+N + ++ A++ N N +Y H D
Sbjct: 407 NVNNLIKNTRCAKSNNQNNNQNKYKNQAHLD 437
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,391
Number of Sequences: 438
Number of extensions: 1743
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -