Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30995
         (506 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125861-1|BAC86325.1|  367|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK124830-1|BAC85961.1|  144|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK123780-1|BAC85690.1|  367|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK123433-1|BAC85616.1|  144|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK074159-1|BAB84985.1|  318|Homo sapiens FLJ00232 protein protein.     31   3.1  
BC125149-1|AAI25150.1|  292|Homo sapiens claudin 23 protein.           30   4.0  
BC125148-1|AAI25149.1|  292|Homo sapiens claudin 23 protein.           30   4.0  
BC016047-1|AAH16047.1|  268|Homo sapiens CLDN23 protein protein.       30   4.0  
AK123547-1|BAC85642.1|  167|Homo sapiens protein ( Homo sapiens ...    30   4.0  

>AK125861-1|BAC86325.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43873 fis, clone TESTI4008429, highly  similar
           to Probable cation-transporting ATPase 2 (EC 3.6.3.-).
           ).
          Length = 367

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +2

Query: 215 RPSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
           RP P P+  C P  PHP      H   + P WR    P T P
Sbjct: 262 RPGPCPNIHCLPTQPHPMKPSVPHPHRARPSWRA--CPRTSP 301


>AK124830-1|BAC85961.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42840 fis, clone BRCOC2001505, moderately
           similar to MYELIN BASIC PROTEIN. ).
          Length = 144

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +2

Query: 200 PTAGHRPSPMPST*CGPPLPHPTTSRRAH*VVSP-PGWRTPHAPCTHP 340
           P     P+P PS  C P  P P TS       SP P W+ P A    P
Sbjct: 29  PGGAASPAPTPSAWCWPVAPEPLTSPVRGLGPSPGPWWQLPVAQAACP 76


>AK123780-1|BAC85690.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41786 fis, clone KIDNE2001361, highly  similar
           to Mus musculus catp mRNA for cation-transporting
           atpase. ).
          Length = 367

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +2

Query: 215 RPSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
           RP P P+  C P  PHP      H   + P WR    P T P
Sbjct: 262 RPGPCPNIHCLPTQPHPMKPSVPHPHRARPSWRA--CPRTSP 301


>AK123433-1|BAC85616.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41439 fis, clone BRHIP3000339, moderately
           similar to MYELIN BASIC PROTEIN. ).
          Length = 144

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +2

Query: 200 PTAGHRPSPMPST*CGPPLPHPTTSRRAH*VVSP-PGWRTPHAPCTHP 340
           P     P+P PS  C P  P P TS       SP P W+ P A    P
Sbjct: 29  PGGAASPAPTPSAWCWPVAPEPLTSPVRGLGPSPGPWWQLPVAQAACP 76


>AK074159-1|BAB84985.1|  318|Homo sapiens FLJ00232 protein protein.
          Length = 318

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +2

Query: 215 RPSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
           RP P P+  C P  PHP      H   + P WR    P T P
Sbjct: 213 RPGPCPNIHCLPTQPHPMKPSVPHPHRARPSWRA--CPRTSP 252


>BC125149-1|AAI25150.1|  292|Homo sapiens claudin 23 protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +2

Query: 200 PTAGHR-PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAP-C-THP 340
           P A HR P P P      P P P     +  V+   GW +  AP C THP
Sbjct: 232 PPAQHRKPKPKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHP 281


>BC125148-1|AAI25149.1|  292|Homo sapiens claudin 23 protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +2

Query: 200 PTAGHR-PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAP-C-THP 340
           P A HR P P P      P P P     +  V+   GW +  AP C THP
Sbjct: 232 PPAQHRKPKPKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHP 281


>BC016047-1|AAH16047.1|  268|Homo sapiens CLDN23 protein protein.
          Length = 268

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +2

Query: 200 PTAGHR-PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAP-C-THP 340
           P A HR P P P      P P P     +  V+   GW +  AP C THP
Sbjct: 208 PPAQHRKPKPKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHP 257


>AK123547-1|BAC85642.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41553 fis, clone COLON2005126. ).
          Length = 167

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +2

Query: 200 PTAGHR-PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAP-C-THP 340
           P A HR P P P      P P P     +  V+   GW +  AP C THP
Sbjct: 107 PPAQHRKPKPKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHP 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,609,769
Number of Sequences: 237096
Number of extensions: 1219209
Number of successful extensions: 2890
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2861
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)