Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30995
(506 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 1.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 1.8
At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetyls... 29 2.4
At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetyls... 29 2.4
At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine (thi... 29 2.4
At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine (thi... 29 2.4
At5g60700.1 68418.m07617 glycosyltransferase family protein 2 co... 28 3.1
At5g37260.1 68418.m04476 myb family transcription factor contain... 28 3.1
At5g28030.2 68418.m03377 cysteine synthase, putative / O-acetyls... 28 3.1
At5g28030.1 68418.m03376 cysteine synthase, putative / O-acetyls... 28 3.1
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 28 3.1
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 3.1
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 3.1
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 4.2
At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putat... 27 5.5
At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putat... 27 5.5
At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putat... 27 5.5
At2g25930.1 68415.m03112 hydroxyproline-rich glycoprotein family... 27 7.3
At3g04940.1 68416.m00536 cysteine synthase, putative / O-acetyls... 27 9.6
At2g43750.1 68415.m05439 cysteine synthase, chloroplast / O-acet... 27 9.6
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 200 PTAGHRPSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
PT +P P T P P P T++ PP + P PC P
Sbjct: 120 PTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPP 166
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 212 HRPSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
H+P P P C PP P PT VV+PP TP P P
Sbjct: 156 HKPPPTP---CPPPTPTPTPP-----VVTPP---TPTPPVITP 187
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 200 PTAGHRPSPMPST*CGPPLPHPTT 271
P+ H+P+P+P+T P P PTT
Sbjct: 422 PSPVHKPTPVPTTPVHKPTPVPTT 445
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 203 TAGHRPSPMPST*CGPPLPHPTT 271
T H+P+P+P+T P P PTT
Sbjct: 434 TPVHKPTPVPTTPVQKPSPVPTT 456
>At5g28020.2 68418.m03375 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCP 208
V+ G GPH ++GIG G+ P
Sbjct: 214 VLSGGQPGPHLIQGIGSGIVP 234
>At5g28020.1 68418.m03374 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCP 208
V+ G GPH ++GIG G+ P
Sbjct: 214 VLSGGQPGPHLIQGIGSGIVP 234
>At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCPAV 202
++ G GPH ++GIG G P+V
Sbjct: 212 ILSGGKPGPHKIQGIGAGFIPSV 234
>At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCPAV 202
++ G GPH ++GIG G P+V
Sbjct: 212 ILSGGKPGPHKIQGIGAGFIPSV 234
>At5g60700.1 68418.m07617 glycosyltransferase family protein 2
contains Pfam profile PF00535: glycosyl transferase,
group 2 family protein
Length = 668
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 257 EAEDRIMWKALGKAYVQQWA 198
E D WKAL YV QWA
Sbjct: 151 EVRDNQWWKALSTGYVTQWA 170
>At5g37260.1 68418.m04476 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 287
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 341 TDGYKERGASS-NQVD*RLSAHGGKSLDAEAEDRIMWKALGKAYV 210
+DG G++S N LS+H +SL EAE + K GK +V
Sbjct: 150 SDGLGSIGSNSPNSSSAELSSHTEESLSLEAETKQSLKLFGKTFV 194
>At5g28030.2 68418.m03377 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCPA 205
V+ G GPH ++GIG G PA
Sbjct: 214 VLSGGKPGPHLIQGIGSGEIPA 235
>At5g28030.1 68418.m03376 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCPA 205
V+ G GPH ++GIG G PA
Sbjct: 214 VLSGGKPGPHLIQGIGSGEIPA 235
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +2
Query: 200 PTAGHRPSPMPST*CGPPLPH----PTTSRRAH*VVSPPG-WRTPHAPCTHP 340
PT P P P T PP P+ PT VV+PP TP APC P
Sbjct: 117 PTVKPPPPPTPYT-PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPP 167
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 218 PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
P P P PPLP P+ S A SPP TP P + P
Sbjct: 65 PPPSPPGSLTPPLPQPSPS--APITPSPPSPTTPSNPRSPP 103
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 218 PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
PSP P PP P P+ V PP TP P P
Sbjct: 91 PSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 131
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 218 PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
PSP P PP P P+ V PP TP P P
Sbjct: 109 PSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 149
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 218 PSPMPST*CGPPLPHPTTSRRAH*VVSPPGWRTPHAPCTHP 340
PSP P PP P P+ V PP TP P P
Sbjct: 127 PSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 167
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 200 PTAGHRPSPM--PST*CGPPLPHPTTSRRAH*VVSPPGWRTP 319
P PSP+ P P P PTTS V SPP P
Sbjct: 40 PVTAETPSPIASPPVPVNEPTPAPTTSPTTSPVASPPQTDAP 81
>At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 430
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 273 EVVGCGSGGPHYVEGIGEGLCP 208
+++ G GPH ++GIG G P
Sbjct: 319 DILSGGKPGPHKIQGIGAGFIP 340
>At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 432
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 273 EVVGCGSGGPHYVEGIGEGLCP 208
+++ G GPH ++GIG G P
Sbjct: 319 DILSGGKPGPHKIQGIGAGFIP 340
>At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 433
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 273 EVVGCGSGGPHYVEGIGEGLCP 208
+++ G GPH ++GIG G P
Sbjct: 319 DILSGGKPGPHKIQGIGAGFIP 340
>At2g25930.1 68415.m03112 hydroxyproline-rich glycoprotein family
protein identical to cDNA nematode responsive protein
GI:2213418
Length = 695
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 188 SLYLPTAGHRP-SPMPST*CGPPLPHPT 268
S Y+P A + P SP P+ C PP P P+
Sbjct: 438 SNYMPFANNPPASPAPNGYCFPPQPPPS 465
>At3g04940.1 68416.m00536 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 324
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCP 208
V+ G G H ++GIG GL P
Sbjct: 215 VISGGKPGTHLIQGIGAGLIP 235
>At2g43750.1 68415.m05439 cysteine synthase, chloroplast /
O-acetylserine (thiol)-lyase / O-acetylserine
sulfhydrylase / cpACS1 (OASB) identical to SP|P47999
Cysteine synthase, chloroplast precursor (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (cpACS1) {Arabidopsis thaliana};
identical to cDNA O-acetylserine lyase (At.OAS.7-4)
GI:6983575
Length = 392
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 270 VVGCGSGGPHYVEGIGEGLCP 208
++ G GPH ++GIG G P
Sbjct: 282 ILSGGKPGPHKIQGIGAGFVP 302
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,483,701
Number of Sequences: 28952
Number of extensions: 157254
Number of successful extensions: 424
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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