Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30994
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    62   4e-12
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.75 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.2  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 62.1 bits (144), Expect = 4e-12
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = +3

Query: 423 LQDVYKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
           LQDVYKIGGIGTVPVGRVETGVLKPG +V   P
Sbjct: 1   LQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAP 33



 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +2

Query: 509 VFAPANITTEVKSVEMHHEALQEAVPG 589
           VFAPANITTEVKSVEMHHEAL EAVPG
Sbjct: 30  VFAPANITTEVKSVEMHHEALPEAVPG 56


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 491 QHTSFN-SADGHGTNTTDFVYVLQ 423
           ++ SFN +A+GHG NT+   Y  Q
Sbjct: 280 EYNSFNWTANGHGHNTSSHNYYAQ 303


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 361 FKLSMLSCHLPAPLISSCVFSCKTYTKSVV 450
           F L++LS     P+I  CV++  TY   ++
Sbjct: 319 FCLNILSIFTYVPMILYCVYTTATYDSFMI 348


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 361 FKLSMLSCHLPAPLISSCVFSCKTYTKSVV 450
           F L++LS     P+I  CV++  TY   ++
Sbjct: 44  FCLNILSIFTYVPMILYCVYTTATYDSFMI 73


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 577 FLESFVVHLHRFDFSSDV 524
           FLE  + H  RF FSS V
Sbjct: 68  FLEMTLAHHCRFKFSSSV 85


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 477 ETGVLKPGTIVSLPPRTS 530
           ETG ++PG I    PR +
Sbjct: 96  ETGSIRPGVIGGSKPRVA 113


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 166 EPRFEEIKKEVSSYITTIGYNPAA 237
           +P F  +   VS  +T  GY+P++
Sbjct: 141 QPMFPSMSVNVSMNMTMHGYHPSS 164


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 199 RLPS*FPQIWAHCMVVQWNPFC 134
           RL   F ++   CM  +W P C
Sbjct: 143 RLRKFFDELLFKCMKEKWIPLC 164


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 199 RLPS*FPQIWAHCMVVQWNPFC 134
           RL   F ++   CM  +W P C
Sbjct: 376 RLRKFFDELLFKCMKEKWIPLC 397


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 199 RLPS*FPQIWAHCMVVQWNPFC 134
           RL   F ++   CM  +W P C
Sbjct: 376 RLRKFFDELLFKCMKEKWIPLC 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,047
Number of Sequences: 336
Number of extensions: 3867
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)