Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30994
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 122 3e-28
03_01_0547 + 4093196-4093657,4094267-4095148 122 3e-28
03_01_0544 + 4082528-4082989,4083585-4084466 122 3e-28
03_01_0543 + 4076981-4077442,4078145-4079026 122 3e-28
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 84 9e-17
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 83 3e-16
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 82 5e-16
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 75 5e-14
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 75 5e-14
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 46 2e-05
02_04_0462 + 23131433-23132836 45 6e-05
12_02_0394 - 18563068-18563108,18563170-18563455,18565606-185656... 33 0.28
06_01_0735 + 5431900-5432044,5432137-5432271,5432710-5432750,543... 30 1.9
02_01_0086 + 613113-613532 29 2.6
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 5.9
03_04_0206 - 18493178-18495310 28 5.9
07_03_0154 + 14509979-14512033 28 7.8
06_03_1165 - 28106604-28106915 28 7.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 122 bits (294), Expect = 3e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD AVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYITTIGYNPAAVAFVPI 255
EI KEVSSY+ +GYNP + FVPI
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPI 193
Score = 101 bits (243), Expect = 4e-22
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIQALDAILPPARPTDKLLRLLLQDV 434
SG+ GDNM+E ST + W+KG L++ALD I P RP+DK LRL LQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETGVLKPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGVLKPGMVVTFGP 270
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/54 (77%), Positives = 51/54 (94%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 673
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 122 bits (294), Expect = 3e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD AVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYITTIGYNPAAVAFVPI 255
EI KEVSSY+ +GYNP + FVPI
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPI 193
Score = 101 bits (243), Expect = 4e-22
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIQALDAILPPARPTDKLLRLLLQDV 434
SG+ GDNM+E ST + W+KG L++ALD I P RP+DK LRL LQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETGVLKPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGVLKPGMVVTFGP 270
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/54 (77%), Positives = 51/54 (94%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 673
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 122 bits (294), Expect = 3e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD AVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYITTIGYNPAAVAFVPI 255
EI KEVSSY+ +GYNP + FVPI
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPI 193
Score = 101 bits (243), Expect = 4e-22
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIQALDAILPPARPTDKLLRLLLQDV 434
SG+ GDNM+E ST + W+KG L++ALD I P RP+DK LRL LQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETGVLKPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGVLKPGMVVTFGP 270
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/54 (77%), Positives = 51/54 (94%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 673
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 122 bits (294), Expect = 3e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD AVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYITTIGYNPAAVAFVPI 255
EI KEVSSY+ +GYNP + FVPI
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPI 193
Score = 101 bits (243), Expect = 4e-22
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIQALDAILPPARPTDKLLRLLLQDV 434
SG+ GDNM+E ST + W+KG L++ALD I P RP+DK LRL LQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETGVLKPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGVLKPGMVVTFGP 270
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/54 (77%), Positives = 51/54 (94%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 673
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 84.2 bits (199), Expect = 9e-17
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD VL+++A GEFE G K GQTREH LLA TLGV +LIV +NKMD +S+ R++
Sbjct: 100 ADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYD 159
Query: 181 EIKKEVSSYITTIGYN-PAAVAFVPI 255
EI+ ++ ++ + GYN V F+PI
Sbjct: 160 EIESKMVPFLRSSGYNVKKDVHFLPI 185
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 345 DGKCLIQALDAILPPARPTDKLLRLLLQDVYKIGGIGTVPVGRVETGVLKPG-TIVSLPP 521
DG CL + LD I P R +R+ + D YK +GTV +G++E+G ++ G +++ +P
Sbjct: 206 DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPN 263
Query: 522 RTSL 533
+T++
Sbjct: 264 KTNV 267
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD VL+++A GEFE G + GQTREH LLA TLGV +L+V +NKMD + +S+ R++
Sbjct: 55 ADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYD 114
Query: 181 EIKKEVSSYITTIGYN-PAAVAFVPI 255
EI+ ++ ++ + GYN V F+PI
Sbjct: 115 EIEGKMVPFLKSSGYNVKKDVHFLPI 140
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 348 GKCLIQALDAILPPARPTDKLLRLLLQDVYKIGGIGTVPVGRVETGVLKPGTIVSLPPRT 527
G CL + LD I P R +R+ + D YK +GTV +G++E+G + G + + P
Sbjct: 162 GPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNK 219
Query: 528 SLLK 539
+ +K
Sbjct: 220 ANVK 223
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 518 PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 667
P +V SV + ++ A PG+NV + + ++ G+V KN
Sbjct: 217 PNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIKN 266
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 174
+D+A+L++ A G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E YS+ R
Sbjct: 336 SDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKER 393
Query: 175 FEEIKKEVSSYITTIGYNPAAVAFVPI 255
F IK ++ +++ + GY +AVA+VPI
Sbjct: 394 FNFIKSQLGAFLRSCGYKDSAVAWVPI 420
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 345 DGKCLIQALDAILPPARPTDKLLRLLLQDVYKIGGIGTVPV-GRVETGVLKPGTIVSLPP 521
DG CL++A+D + PP+R K LRL + DV+ +G V + G+VE G + G+ + + P
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMP 501
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 74.9 bits (176), Expect = 5e-14
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 165
AD+A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS
Sbjct: 349 ADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYS 406
Query: 166 EPRFEEIKKEVSSYITTIGYNPAAVAFVPI 255
+ RFE IK ++ S++ + + ++V ++P+
Sbjct: 407 KERFEFIKVQLGSFLRSCNFKDSSVTWIPL 436
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 348 GKCLIQALDAILPPARPTDKLLRLLLQDVYKIGGIGT-VPVGRVETGVLKPGTIVSLPP 521
G CL+ A+D++ P+R K L L + DV K G G++ETG ++ G+ V + P
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 74.9 bits (176), Expect = 5e-14
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 ADSAVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 165
AD+A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS
Sbjct: 349 ADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYS 406
Query: 166 EPRFEEIKKEVSSYITTIGYNPAAVAFVPI 255
+ RFE IK ++ S++ + + ++V ++P+
Sbjct: 407 KERFEFIKVQLGSFLRSCNFKDSSVTWIPL 436
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 348 GKCLIQALDAILPPARPTDKLLRLLLQDVYKIGGIGT-VPVGRVETGVLKPGTIVSLPP 521
G CL+ A+D++ P+R K L L + DV K G G++ETG ++ G+ V + P
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +3
Query: 285 PSTKMPWFKGWQVERKEGKAD--GKC----LIQALDAILP-PARPTDKLLRLLLQDVYKI 443
P ++P +G + +G D GK L+ A+D +P P R DK + ++DV+ I
Sbjct: 219 PGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSI 278
Query: 444 GGIGTVPVGRVETGVLKPGTIVSL 515
G GTV GRVE G +K G V +
Sbjct: 279 QGRGTVVTGRVEQGTIKTGEDVEI 302
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 4 DSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 159
D +L+V+A G QT+EH LLA +GV L+ +NK+D+ + P
Sbjct: 155 DGGILVVSAPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDP 199
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 527 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 649
+ T V VEM + L GDNVG ++ + +++RG V
Sbjct: 311 LKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQV 351
>02_04_0462 + 23131433-23132836
Length = 467
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 357 LIQALDAILP-PARPTDKLLRLLLQDVYKIGGIGTVPVGRVETGVLKPGTIVSL 515
LI ++D +P P R TD L ++DV+ I G GTV GR+E G +K G V +
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDI 313
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +1
Query: 4 DSAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 183
D A+L+V+ G QT+EH LLA +GV +++V +NK D + E +
Sbjct: 158 DGAILVVSGADGPMP-------QTKEHILLAKQVGVPKIVVFLNKKDQVD---DEELLQL 207
Query: 184 IKKEVSSYITTIGYNPAAVAFV 249
++ EV +++ Y+ V V
Sbjct: 208 VELEVRELLSSYEYDGDEVPIV 229
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 539 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 649
V VEM + + +A+ GDNVG ++ + ++ RG V
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMV 360
>12_02_0394 -
18563068-18563108,18563170-18563455,18565606-18565664,
18567524-18567611
Length = 157
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 GVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-ITTIGYNPAAVAFVPILDGTETTCW 282
GV++ VG N + S + +S+ +I+K++ ++ Y+ A VA VP ++ C+
Sbjct: 33 GVEKGEVGGN-VRSLQVMHSKELQAKIRKQLQRVELSPSLYDTAWVAMVPERSSSQAPCY 91
Query: 283 SLQPKCLG------SRDGRWSVKKAKLTENASFKLSMLSC 384
P+C+ DG W + + L+ N LS L+C
Sbjct: 92 ---PQCIEWILQNQHDDGSWGINSSSLSVNKDILLSTLAC 128
>06_01_0735 +
5431900-5432044,5432137-5432271,5432710-5432750,
5433463-5433579,5433779-5433898,5433982-5434076,
5434149-5434242,5434592-5434723,5435191-5435303,
5435443-5435566,5435884-5436000,5436083-5436177,
5436269-5436362,5436655-5436780,5436854-5436966,
5437067-5437256,5437395-5437508,5437551-5437598
Length = 670
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 601 TYIVSRYSFLESFVVHLHRFDF-SSDVRGGKDTM 503
TY +++ SFL + ++HL R F S +RG K TM
Sbjct: 288 TYNIAQISFLVASILHLRRVFFGGSYIRGHKSTM 321
>02_01_0086 + 613113-613532
Length = 139
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 84 CLARFHPRCQTAHRRSKQNGFH*TTIQ*AQI*GNQEGSLLIHHDDWLQPSCCCFRAHSGW 263
CL++ +PR RR +Q +H + + N E LL H WL +G
Sbjct: 30 CLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHLPN-ENFLLPHDRPWLP---------NGS 79
Query: 264 HGDNMLEPSTKMPWFKG 314
+N+ + T++PWF G
Sbjct: 80 AENNISQFFTRVPWFDG 96
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 192 LLDFLKSGLTVWWFSGIHFVY 130
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 130 VNKMDSTEPPYSEPRFEEIKKEV 198
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>07_03_0154 + 14509979-14512033
Length = 684
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 282 PTCCLRAIQNGHESNSSWVVANRRDV*GDFLLDFLKSGLTVWWFSGIHFVYSYDELFDTE 103
P+C R Q G N V +R G LD +K+G + FSGI + E+
Sbjct: 517 PSCPNRVSQKGLR-NRLEVFRSRETGWGVRSLDLIKAGTFICEFSGIVLTHQQSEIMAAN 575
Query: 102 GE 97
G+
Sbjct: 576 GD 577
>06_03_1165 - 28106604-28106915
Length = 103
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 538 SQICGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 654
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,867,391
Number of Sequences: 37544
Number of extensions: 483588
Number of successful extensions: 1530
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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