Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30990
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 140 1e-32
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 127 1e-28
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 117 1e-25
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 109 5e-23
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 104 1e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 6e-21
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 102 6e-21
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 101 1e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 97 3e-19
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 93 5e-18
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 88 1e-16
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 88 1e-16
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 80 4e-14
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 77 2e-13
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 76 4e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 71 2e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 66 6e-10
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 62 8e-09
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 52 8e-06
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 50 4e-05
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 43 0.005
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 38 0.11
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 38 0.11
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.25
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.44
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 1.0
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 34 1.8
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 34 1.8
UniRef50_Q8YXN7 Cluster: All1175 protein; n=4; Nostocaceae|Rep: ... 34 2.4
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 33 3.1
UniRef50_Q9I2M2 Cluster: Probable outer membrane protein; n=6; P... 33 4.1
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 4.1
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 4.1
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 5.4
UniRef50_Q8BJM3 Cluster: Growth inhibition and differentiation-r... 33 5.4
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 32 7.2
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 32 7.2
UniRef50_UPI0000E24B4A Cluster: PREDICTED: hypothetical protein;... 32 9.5
UniRef50_UPI00006CB684 Cluster: hypothetical protein TTHERM_0044... 32 9.5
UniRef50_Q4H3I6 Cluster: Transcription factor protein; n=3; Eume... 32 9.5
UniRef50_Q4PIM6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 32 9.5
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 140 bits (340), Expect = 1e-32
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCY
Sbjct: 99 VLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCY 158
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSD 255
AQH+Q++ IR KM II R++T++D
Sbjct: 159 AQHSQIKNIRAKMTAIIKREITSTD 183
Score = 98.7 bits (235), Expect = 7e-20
Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S LMELH
Sbjct: 184 LKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAA 243
Query: 435 XXXDKS------ERPEGYEPPVQESV 494
+ +RPEGYEPPVQ SV
Sbjct: 244 EVSTGAASGVVVDRPEGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 127 bits (307), Expect = 1e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 4 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 183
L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YA
Sbjct: 97 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 156
Query: 184 QHTQVRAIRKKMCEIITRDVTNSD 255
QH QVR IRKKM EI+TR+V +D
Sbjct: 157 QHQQVRQIRKKMMEIMTREVQTND 180
Score = 108 bits (260), Expect = 7e-23
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 435 XXXD----KSERPEGYEPPVQESV 494
D K ER +GYEPPVQESV
Sbjct: 241 ATGDETGAKVERADGYEPPVQESV 264
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 117 bits (282), Expect = 1e-25
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCY
Sbjct: 491 VLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCY 550
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSD 255
AQ +Q+R IR+KM EI+T T+ D
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCD 575
Score = 72.9 bits (171), Expect = 4e-12
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 576 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVH---GDYSE 632
Query: 435 XXXDKSERPEGYEPPVQESV 494
K ERP + PV E V
Sbjct: 633 DVGTKLERPA--DEPVAEGV 650
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 109 bits (261), Expect = 5e-23
Identities = 50/85 (58%), Positives = 66/85 (77%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT Y
Sbjct: 95 VLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSY 154
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSD 255
A+ ++V+AIRKKM +I+T V+++D
Sbjct: 155 AKTSRVKAIRKKMVDILTETVSSND 179
Score = 38.7 bits (86), Expect = 0.083
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 288 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 410
++A+ I I+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 205 TLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 104 bits (249), Expect = 1e-21
Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 128 LKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGCSSGK 187
Query: 435 XXXD----KSERPEGYEPPVQESV 494
D K ER +GYE PVQESV
Sbjct: 188 ATGDETGVKVERADGYELPVQESV 211
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 6e-21
Identities = 44/81 (54%), Positives = 63/81 (77%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 192
FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+
Sbjct: 102 FHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSA 161
Query: 193 QVRAIRKKMCEIITRDVTNSD 255
Q++ IRK M +IT++ + +
Sbjct: 162 QIKKIRKIMNNLITKEAASRE 182
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 102 bits (244), Expect = 6e-21
Identities = 51/79 (64%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = +3
Query: 270 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD- 446
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH D
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 447 ---KSERPEGYEPPVQESV 494
K ER EGYEPPVQESV
Sbjct: 61 TGAKVERAEGYEPPVQESV 79
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 101 bits (242), Expect = 1e-20
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +1
Query: 4 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 183
L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA
Sbjct: 97 LTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYA 156
Query: 184 QHTQVRAIRKKMCEIITRDVT 246
+Q+RAIR+KM EII R+ +
Sbjct: 157 ASSQIRAIRRKMTEIIQREAS 177
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/52 (55%), Positives = 43/52 (82%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 410
L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+ LH
Sbjct: 181 LQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALH 232
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 96.7 bits (230), Expect = 3e-19
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 4 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 183
L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+ YA
Sbjct: 23 LTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKSHAYA 81
Query: 184 QHTQVRAIRKKMCEIITRDVTNSD 255
Q T+++ +R ++ E++ R+V D
Sbjct: 82 QTTRIKKLRAEIVEVVQREVARCD 105
Score = 68.5 bits (160), Expect = 9e-11
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++ +++ELH
Sbjct: 106 LKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELH--SEGKAD 163
Query: 435 XXXDKSERPEGYEPPVQESV 494
+ RP+ YEPPV ++V
Sbjct: 164 EFGEGVPRPDHYEPPVVDAV 183
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 92.7 bits (220), Expect = 5e-18
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCY 180
+F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCY
Sbjct: 102 SFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCY 161
Query: 181 AQHTQVRAIRKKMCEIITRD 240
A+ +QVRAIR+K+ IT +
Sbjct: 162 AKSSQVRAIRRKINTFITNE 181
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 410
+ E LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL+
Sbjct: 187 IAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 88.2 bits (209), Expect = 1e-16
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 164 LKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELHALGLHGSH 223
Query: 435 XXXDKSERPEGYEPPVQESV 494
KS+R YEPPVQESV
Sbjct: 224 R---KSDR---YEPPVQESV 237
Score = 58.8 bits (136), Expect = 7e-08
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDSLSQRKTCY 180
L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+ TN + R+
Sbjct: 82 LTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVC 140
Query: 181 AQHTQVRAI 207
AQ+ QV I
Sbjct: 141 AQYQQVHQI 149
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 88.2 bits (209), Expect = 1e-16
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = +1
Query: 10 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 189
+F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ
Sbjct: 98 SFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQR 157
Query: 190 TQVRAIRKKMCEIITRDVT 246
+Q++ IRKK+ EI+ ++V+
Sbjct: 158 SQIKDIRKKIVEIVLKEVS 176
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +3
Query: 285 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 410
+S+AK+I KA I+PL+++ +RKVK++KRP+ + KL E +
Sbjct: 190 ESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFY 231
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 79.8 bits (188), Expect = 4e-14
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 192
F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KTCY +H+
Sbjct: 52 FDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHS 111
Query: 193 QVRAIRKKMCEIITRDVTNSD 255
+ IRK M ++I +++ D
Sbjct: 112 DEKKIRKIMFDVIEEELSGCD 132
Score = 37.1 bits (82), Expect = 0.25
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 371
+++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 192
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 193 QVRAIRKKMCEIITRDVTNSD 255
Q RA+R+++ +II ++ N D
Sbjct: 156 QKRALRRRITDIIIKEGINMD 176
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 76.2 bits (179), Expect = 4e-13
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CY
Sbjct: 99 LLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCY 158
Query: 181 AQHTQVRAIRKKMCEIITR 237
A+ V+ +R ++ ++I R
Sbjct: 159 AKQRLVKWLRMRITKMIKR 177
Score = 41.9 bits (94), Expect = 0.009
Identities = 17/52 (32%), Positives = 34/52 (65%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 410
++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+ H
Sbjct: 184 IKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAH 235
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S + Y
Sbjct: 92 VYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTY 151
Query: 181 AQHTQVRAIRKKMCEIIT 234
A + R +R M + +T
Sbjct: 152 ANSHKARQVRDVMIKALT 169
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 65.7 bits (153), Expect = 6e-10
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 4 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 183
L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+
Sbjct: 97 LTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHV 156
Query: 184 QHTQVRAIRKKMCEIITRDV 243
+ +R +R + E + ++
Sbjct: 157 KGRVIRMMRAGIYETLHNEL 176
Score = 34.7 bits (76), Expect = 1.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 264 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 410
+V KL + + +A I RDV IR+VKV+KRPR + L +H
Sbjct: 184 LVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 62.1 bits (144), Expect = 8e-09
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +3
Query: 336 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 494
R +C++KVK+LK+P+FE+ KLMELH D K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.0 bits (119), Expect = 8e-06
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +1
Query: 19 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 198
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q+
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQM 134
Query: 199 RAIRKKMCEIITRDVTNSD 255
+AIR+ M +I+ + + +D
Sbjct: 135 QAIREMMVDIVKKRASETD 153
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 49.6 bits (113), Expect = 4e-05
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +1
Query: 4 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 183
L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T + +K+
Sbjct: 88 LTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKS--- 144
Query: 184 QHTQVRAIRKKMCEIITRDVTNSDSGRW 267
A+RKKM E + + DSG++
Sbjct: 145 ------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.7 bits (96), Expect = 0.005
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 192
F G L D +R +V++ + I+ IDV T DGY +RV + FT T A+ +
Sbjct: 75 FEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTS 125
Query: 193 QVRAIRKKMCEIITRDVTNSD 255
Q RAIRK+M ++I + D
Sbjct: 126 QQRAIRKEMFKVIEENAKECD 146
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 38.3 bits (85), Expect = 0.11
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 174
F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S KT
Sbjct: 86 FIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT 139
Score = 32.7 bits (71), Expect = 5.4
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 261 EVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 401
E V +I D +++ K IYP+R + IRK +VL P +I +L+
Sbjct: 160 EYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 38.3 bits (85), Expect = 0.11
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +1
Query: 10 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 189
+F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K A+
Sbjct: 80 SFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK---------RART 130
Query: 190 TQVRAIRKKMCEIITR 237
+Q+ +IR+ M ++ +
Sbjct: 131 SQIESIRQIMINVVNK 146
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.25
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 25 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 171
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.44
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 192
F G +L D +R + ++ + + +V T DGY LRV + FT R+ C + +
Sbjct: 79 FKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTS 129
Query: 193 QVRAIRKKMCEIITRDVTNS 252
Q AIRK M EI+ + S
Sbjct: 130 QKSAIRKVMQEIVEQKARES 149
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 35.1 bits (77), Expect = 1.0
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +1
Query: 25 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 204
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 205 IRKKMCEII 231
IR+ M +++
Sbjct: 134 IRRTMIDLV 142
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 467 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 291
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 290 GV 285
G+
Sbjct: 5545 GL 5546
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQH 189
F +LT + L + ++ + IE +DV T DGY LRV + FT + SQ++ A
Sbjct: 85 FWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIM 144
Query: 190 TQV 198
Q+
Sbjct: 145 RQI 147
>UniRef50_Q8YXN7 Cluster: All1175 protein; n=4; Nostocaceae|Rep:
All1175 protein - Anabaena sp. (strain PCC 7120)
Length = 880
Score = 33.9 bits (74), Expect = 2.4
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -1
Query: 419 AFAVKFHQLRDLETGPLQHFHLSDA-NIAQRVDAMAGLLDV-LGNGVRNQLVHHLPESEL 246
A +VKF LR+L QH L D NIA+ + +V +G+ V Q VH+LPES+L
Sbjct: 193 AASVKFPDLRELGK---QHPILKDILNIAENPKINPFVREVTVGHAVYEQSVHNLPESDL 249
Query: 245 VTSRVM 228
+ + ++
Sbjct: 250 IRTYII 255
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 33.5 bits (73), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 144
F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 87 FAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q9I2M2 Cluster: Probable outer membrane protein; n=6;
Pseudomonas aeruginosa|Rep: Probable outer membrane
protein - Pseudomonas aeruginosa
Length = 425
Score = 33.1 bits (72), Expect = 4.1
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = -1
Query: 473 LVALRPFRLVSGFPLASTAFAVKFHQLRDLETGPLQHFHLSDANIAQRV--DAMAGLLDV 300
LV P LV P++ + R + PLQ L DAN+A+ +A A LL
Sbjct: 209 LVGQEPADLVEPEPMSLQRYLAASDMARVIRESPLQRKALEDANVAEAEVREAKASLLPQ 268
Query: 299 L---GNGVRNQLVHHLPESELVTS 237
L + +R ++ H PES+ V S
Sbjct: 269 LNLEASALRREIGGH-PESDSVVS 291
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 243 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 136
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 4.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 171
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 23 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 148
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q8BJM3 Cluster: Growth inhibition and
differentiation-related protein 88 homolog; n=10;
Eutheria|Rep: Growth inhibition and
differentiation-related protein 88 homolog - Mus
musculus (Mouse)
Length = 775
Score = 32.7 bits (71), Expect = 5.4
Identities = 23/111 (20%), Positives = 37/111 (33%)
Frame = -3
Query: 501 LIKHSLEREARSPPAVQTXXXXXXXXXXXXREVPSTSRSRNGASSTLSPFGCKHRAEGRC 322
L+K S + E PPA S+ R S C+
Sbjct: 30 LLKSSDQEEGHGPPAFVPKDQKEGCLPQKISASKPESQRRGAGHSDRKDVDCREGKRSAS 89
Query: 321 HGRPSRCPWQWSQESTCSPPP*VRVSDVACNDFTHFLSDCSDLSVLGVARL 169
R RCP + ++E CS ++ + + H D +S + + RL
Sbjct: 90 QLRKDRCPQKQNKEKACSKKGAEESTEASSQEHQHRAPDAGIVSSIPLQRL 140
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 32.3 bits (70), Expect = 7.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 402 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 277
P R A + P H RC+G PS P+ WSQ S
Sbjct: 175 PRIHHGRWQALFPVGPVNTSHGGTYRCYGSPSSYPYAWSQPS 216
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 32.3 bits (70), Expect = 7.2
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +1
Query: 13 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 192
F+G L+ D + MV K L+E +I + T V+ +F + +T +L Y + +
Sbjct: 98 FNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRS 156
Query: 193 QVRAIRKKMCEIITRDVTN 249
++R I ++ I + + N
Sbjct: 157 RIRKINRESILCIKKMLEN 175
>UniRef50_UPI0000E24B4A Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 446
Score = 31.9 bits (69), Expect = 9.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 402 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPW 295
PSTS S G + + G RA G C GR R W
Sbjct: 369 PSTSDSVCGRAEPAASLGAAQRAPGGCSGRRQRATW 404
>UniRef50_UPI00006CB684 Cluster: hypothetical protein
TTHERM_00446420; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00446420 - Tetrahymena
thermophila SB210
Length = 1054
Score = 31.9 bits (69), Expect = 9.5
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 156 LEPTQDVLRPAHSGQSNQKENV*NHYTRRH*L*LREVVNKLIPDSIAKDIEKACHGI 326
L+P Q V + GQ+NQ +N N+ + RE V +L PDS+ + +K H I
Sbjct: 471 LQPNQAVNKTFSEGQTNQNQNQENYQNINN---TREDVGQL-PDSLGQPFQKQFHSI 523
>UniRef50_Q4H3I6 Cluster: Transcription factor protein; n=3;
Eumetazoa|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 732
Score = 31.9 bits (69), Expect = 9.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 161 ANARRATPSTLRSEQSERKCVKSLHATSLTLTQGGGEQVDS*LHCQGHREGL 316
AN + P+ KS+H +S L QGGGE V + C G R+ L
Sbjct: 27 ANTMKCKPTAYYGSPDLADTKKSVHRSSTQLVQGGGEAVSNNAQC-GSRQRL 77
>UniRef50_Q4PIM6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 554
Score = 31.9 bits (69), Expect = 9.5
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = +2
Query: 230 LHATSLTLTQGGGEQVDS*LHCQGHREGLPWHLPSARCLHPKGESVEEAPFRD 388
LHATS T G V+ L G R PWH C H K +E+AP D
Sbjct: 43 LHATSSKCTHYGAPLVNGVLTGDG-RIICPWH---GACFHAKDGEIEDAPALD 91
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 31.9 bits (69), Expect = 9.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 267 VNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 404
V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 65 VTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,492,841
Number of Sequences: 1657284
Number of extensions: 9787212
Number of successful extensions: 28354
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 27483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28342
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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