Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30990
(530 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 140 1e-33
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 137 1e-32
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 137 1e-32
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 137 1e-32
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 131 7e-31
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 120 2e-27
AY094661-1|AAM11014.1| 187|Drosophila melanogaster AT26093p pro... 28 6.9
AE014297-578|AAF54048.1| 187|Drosophila melanogaster CG1288-PA ... 28 6.9
AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p pro... 28 9.1
AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA... 28 9.1
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 140 bits (339), Expect = 1e-33
Identities = 70/115 (60%), Positives = 83/115 (72%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 99 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMASTLCAMF 345
AQ +QVR IR +M +IIT +V+ +D + TS T L + S++ A MF
Sbjct: 159 AQQSQVRKIRARMTDIITNEVSGADLKQLLTSWPWTRLRKISKKAVSAYIHYMMF 213
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 137 bits (331), Expect = 1e-32
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 99 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSD 255
AQ +QVR IR +M +IIT +V+ +D
Sbjct: 159 AQQSQVRKIRARMTDIITNEVSGAD 183
Score = 101 bits (242), Expect = 6e-22
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 184 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 243
Query: 435 XXXDKSE-----RPEGYEPPVQESV 494
SE RPEGYEPPVQE+V
Sbjct: 244 EAVVSSEGAVIDRPEGYEPPVQEAV 268
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 137 bits (331), Expect = 1e-32
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 49 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 108
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSD 255
AQ +QVR IR +M +IIT +V+ +D
Sbjct: 109 AQQSQVRKIRARMTDIITNEVSGAD 133
Score = 101 bits (242), Expect = 6e-22
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 193
Query: 435 XXXDKSE-----RPEGYEPPVQESV 494
SE RPEGYEPPVQE+V
Sbjct: 194 EAVVSSEGAVIDRPEGYEPPVQEAV 218
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 137 bits (331), Expect = 1e-32
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 99 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158
Query: 181 AQHTQVRAIRKKMCEIITRDVTNSD 255
AQ +QVR IR +M +IIT +V+ +D
Sbjct: 159 AQQSQVRKIRARMTDIITNEVSGAD 183
Score = 101 bits (242), Expect = 6e-22
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 184 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 243
Query: 435 XXXDKSE-----RPEGYEPPVQESV 494
SE RPEGYEPPVQE+V
Sbjct: 244 EAVVSSEGAVIDRPEGYEPPVQEAV 268
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 131 bits (316), Expect = 7e-31
Identities = 61/86 (70%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 180
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 100 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 159
Query: 181 AQHTQVRAIRK-KMCEIITRDVTNSD 255
A +QVR IR +M +IIT +V+ +D
Sbjct: 160 AHESQVRKIRSGRMTDIITNEVSGAD 185
Score = 87.8 bits (208), Expect = 8e-18
Identities = 48/85 (56%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 186 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 245
Query: 435 XXXDKSE-RPEG----YEPPVQESV 494
SE P+ +PPVQESV
Sbjct: 246 EAVVSSEGAPKSTALKVKPPVQESV 270
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 120 bits (288), Expect = 2e-27
Identities = 55/78 (70%), Positives = 64/78 (82%)
Frame = +1
Query: 22 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 201
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 202 AIRKKMCEIITRDVTNSD 255
IR +M +IIT +V+ +D
Sbjct: 61 KIRARMTDIITNEVSGAD 78
Score = 101 bits (242), Expect = 6e-22
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Frame = +3
Query: 255 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 434
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 79 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 138
Query: 435 XXXDKSE-----RPEGYEPPVQESV 494
SE RPEGYEPPVQE+V
Sbjct: 139 EAVVSSEGAVIDRPEGYEPPVQEAV 163
>AY094661-1|AAM11014.1| 187|Drosophila melanogaster AT26093p
protein.
Length = 187
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Frame = +2
Query: 149 RTP*ANARRATPSTLRSEQSERKCVKSLHATSLTLTQGGGEQVDS*LHCQGHREGLPWHL 328
+TP + R A+P LR+ + C L + +L + G V+ Q + P+H
Sbjct: 9 QTPAGDRRSASPDYLRTLLQDILCFLVLLSVALLIVAGILFVVEDVSRLQQQHQHQPYHH 68
Query: 329 PSARCLHP-------KGESVEEAP 379
R + P KG +EEAP
Sbjct: 69 HHHRHMRPDQIANELKGSPIEEAP 92
>AE014297-578|AAF54048.1| 187|Drosophila melanogaster CG1288-PA
protein.
Length = 187
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Frame = +2
Query: 149 RTP*ANARRATPSTLRSEQSERKCVKSLHATSLTLTQGGGEQVDS*LHCQGHREGLPWHL 328
+TP + R A+P LR+ + C L + +L + G V+ Q + P+H
Sbjct: 9 QTPAGDRRSASPDYLRTLLQDILCFLVLLSVALLIVAGILFVVEDVSRLQQQHQHQPYHH 68
Query: 329 PSARCLHP-------KGESVEEAP 379
R + P KG +EEAP
Sbjct: 69 HHHRHMRPDQIANELKGSPIEEAP 92
>AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p
protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 180 RPAHSGQSNQKENV*NHYTRRH*L*LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 359
+P S S + N+ LR V N++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 360 KVLKRPRFEISKLME 404
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
>AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA
protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 180 RPAHSGQSNQKENV*NHYTRRH*L*LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 359
+P S S + N+ LR V N++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 360 KVLKRPRFEISKLME 404
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,026,467
Number of Sequences: 53049
Number of extensions: 473663
Number of successful extensions: 1334
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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