Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30988
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   141   7e-36
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   141   7e-36
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   124   6e-31
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  141 bits (341), Expect = 7e-36
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = +3

Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
           AAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+
Sbjct: 6   AAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRL 65

Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
           V +  Q+FK+K+K D++ N RALR
Sbjct: 66  VEYCTQDFKKKHKADISGNPRALR 89


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  141 bits (341), Expect = 7e-36
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = +3

Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
           AAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+
Sbjct: 6   AAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRL 65

Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
           V +  Q+FK+K+K D++ N RALR
Sbjct: 66  VEYCTQDFKKKHKADISGNPRALR 89


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  124 bits (300), Expect = 6e-31
 Identities = 54/84 (64%), Positives = 76/84 (90%)
 Frame = +3

Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
           AAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD ++
Sbjct: 6   AAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKV 64

Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
           +++F++  K+K+KKD+  +K+AL+
Sbjct: 65  MDYFIKMVKQKHKKDIRADKKALQ 88


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 268 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 393
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 40  LPAREGGDHRQRPGQQDH 93
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 339 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 464
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 451 TKDAGTISGLNVLRIINEP 507
           TKDAG +S   +  ++N+P
Sbjct: 330 TKDAGLLSYPEICTLLNDP 348


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/61 (18%), Positives = 24/61 (39%)
 Frame = -1

Query: 701 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 522
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 521 N 519
           +
Sbjct: 270 S 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,339
Number of Sequences: 336
Number of extensions: 4617
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)