Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30988
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 167 2e-42
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 5e-42
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 144 2e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 134 1e-32
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 103 4e-23
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 67 3e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 56 8e-09
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 38 0.002
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 1.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.3
SPBC32H8.03 |bem46||esterase/lipase |Schizosaccharomyces pombe|c... 27 3.1
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 26 5.4
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 5.4
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 5.4
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 26 5.4
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 9.4
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 9.4
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 9.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 167 bits (405), Expect = 2e-42
Identities = 78/111 (70%), Positives = 91/111 (81%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTI
Sbjct: 6 GIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTI 65
Query: 182 FDAKRLIGRKFEDATVQADMKHWPSRLSVMEANLRSR*HIRVKTKPFSPRK 334
FDAKRLIGRKF+D VQ+DMKHWP ++ + + + +TK F+P +
Sbjct: 66 FDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEE 116
Score = 147 bits (357), Expect = 1e-36
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+
Sbjct: 176 AAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRL 235
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
VNHF+QEFKRK KKD+ N RA+R
Sbjct: 236 VNHFIQEFKRKNKKDITGNARAVR 259
Score = 137 bits (331), Expect = 2e-33
Identities = 65/85 (76%), Positives = 74/85 (87%)
Frame = +1
Query: 253 FEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 432
F+V+S GKP ++V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFN
Sbjct: 90 FKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFN 149
Query: 433 DSQRQATKDAGTISGLNVLRIINEP 507
DSQRQATKDAG I+GLNVLRIINEP
Sbjct: 150 DSQRQATKDAGLIAGLNVLRIINEP 174
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (402), Expect = 5e-42
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTI
Sbjct: 6 GIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTI 65
Query: 182 FDAKRLIGRKFEDATVQADMKHWPSRLSVMEANLRSR*HIRVKTKPFSPRK 334
FDAKRLIGR+F D VQ+DMKHWP ++ + + + +TK F+P +
Sbjct: 66 FDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEE 116
Score = 143 bits (346), Expect = 3e-35
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+
Sbjct: 176 AAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRL 235
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
VNHF QEFKRK KKD+ N RA+R
Sbjct: 236 VNHFAQEFKRKNKKDITGNARAVR 259
Score = 131 bits (317), Expect = 1e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +1
Query: 253 FEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 432
F+V+ GKP I+V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFN
Sbjct: 90 FKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFN 149
Query: 433 DSQRQATKDAGTISGLNVLRIINEP 507
DSQRQATKDAG I+GLNVLRIINEP
Sbjct: 150 DSQRQATKDAGLIAGLNVLRIINEP 174
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 144 bits (348), Expect = 2e-35
Identities = 63/87 (72%), Positives = 74/87 (85%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+
Sbjct: 10 GIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTV 69
Query: 182 FDAKRLIGRKFEDATVQADMKHWPSRL 262
FDAKRLIGR++ED Q D+KHWP ++
Sbjct: 70 FDAKRLIGRRYEDPETQKDIKHWPFKV 96
Score = 130 bits (314), Expect = 2e-31
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYGLD K +NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +
Sbjct: 180 AAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNAL 239
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
V HF+QEFKRK K D++ + RALR
Sbjct: 240 VEHFIQEFKRKQKIDISDDPRALR 263
Score = 117 bits (282), Expect = 2e-27
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +1
Query: 253 FEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 432
F+V+ + G P I+V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITVPAYF+
Sbjct: 94 FKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFS 153
Query: 433 DSQRQATKDAGTISGLNVLRIINEP 507
DSQR ATKDAG I+GLNVLRIINEP
Sbjct: 154 DSQRAATKDAGAIAGLNVLRIINEP 178
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 134 bits (325), Expect = 1e-32
Identities = 64/111 (57%), Positives = 81/111 (72%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NTI
Sbjct: 39 GIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTI 98
Query: 182 FDAKRLIGRKFEDATVQADMKHWPSRLSVMEANLRSR*HIRVKTKPFSPRK 334
FD KRLIGRKF++ T+ D+K +P + + ++ K K F+P +
Sbjct: 99 FDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEE 149
Score = 126 bits (305), Expect = 3e-30
Identities = 56/89 (62%), Positives = 75/89 (84%)
Frame = +1
Query: 241 EALAFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 420
++ F +V+D +P ++V G+ K F PEE+S+M+L+KMK+TAEAYLGK V +AV+TVP
Sbjct: 119 KSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVP 178
Query: 421 AYFNDSQRQATKDAGTISGLNVLRIINEP 507
AYFND+QRQATKDAGTI+GLNV+RI+NEP
Sbjct: 179 AYFNDAQRQATKDAGTIAGLNVIRIVNEP 207
Score = 109 bits (263), Expect = 3e-25
Identities = 47/83 (56%), Positives = 69/83 (83%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYGLDK T E++++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR+
Sbjct: 209 AAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRV 267
Query: 690 VNHFVQEFKRKYKKDLATNKRAL 758
+N+ + + RK D+ + +A+
Sbjct: 268 INYLARTYNRKNNVDVTKDLKAM 290
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 103 bits (246), Expect = 4e-23
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAA+AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +
Sbjct: 222 AAALAYGLDKKN--DAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVAL 279
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
V H V+ FK+ DL+ ++ A++
Sbjct: 280 VRHIVETFKKNEGLDLSKDRLAVQ 303
Score = 102 bits (244), Expect = 7e-23
Identities = 44/65 (67%), Positives = 55/65 (84%)
Frame = +1
Query: 313 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 492
KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR
Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLR 215
Query: 493 IINEP 507
++NEP
Sbjct: 216 VVNEP 220
Score = 98.7 bits (235), Expect = 8e-22
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNT 178
GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +NP NT
Sbjct: 54 GIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENT 113
Query: 179 IFDAKRLIGRKFEDATVQADMKHWPSRL 262
F KRLIGR+F++ VQ D+K P ++
Sbjct: 114 FFATKRLIGRRFKEPEVQRDIKEVPYKI 141
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 66.9 bits (156), Expect = 3e-12
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 677
AAA+ YG+ K E R V I D G + VSI+ G F +KST D +LG +
Sbjct: 180 AAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNM 239
Query: 678 DNRMVNHFVQEFKRKYKKDLATNKRA 755
D ++++F EFK KYK D+ +N +A
Sbjct: 240 DKALIDYFAAEFKEKYKIDVLSNPKA 265
Score = 66.1 bits (154), Expect = 5e-12
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A N NT+
Sbjct: 9 GIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTV 68
Query: 182 FDAKRLIGRKFEDATVQ 232
KRL GR ++D ++
Sbjct: 69 GSLKRLAGRTYDDPEIK 85
Score = 60.1 bits (139), Expect = 4e-10
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = +1
Query: 289 KVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGT 468
KV Y E+ F ++ + TK+K AEA L +V + VI++PA+F D QR+A +A
Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAAN 165
Query: 469 ISGLNVLRIINE 504
I+GLN LR++N+
Sbjct: 166 IAGLNPLRLMND 177
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 55.6 bits (128), Expect = 8e-09
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +1
Query: 307 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 486
++K E S L ++ E+AE +LG V V++VP YF D+QR+A + A +GL V
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPV 193
Query: 487 LRIINEP 507
L++I++P
Sbjct: 194 LQLIHDP 200
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/76 (27%), Positives = 44/76 (57%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N++
Sbjct: 28 GISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNSV 87
Query: 182 FDAKRLIGRKFEDATV 229
+ + L+G+ ++ T+
Sbjct: 88 TNFRDLLGKSHDELTL 103
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 552 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 731
++ V++ + G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K
Sbjct: 216 DKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGI 275
Query: 732 DLATNKRAL 758
D N R+L
Sbjct: 276 DPRKNARSL 284
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +1
Query: 307 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 486
+++ + EE+ +M + AE + + + V+TVP +FN+ QR +A I +V
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHV 190
Query: 487 LRIINE 504
L +I++
Sbjct: 191 LALIDD 196
Score = 35.9 bits (79), Expect = 0.007
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 IDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
ID GT ++ + + G +EI+ R S VAF ER+ G A N P ++I
Sbjct: 27 IDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSI 86
Query: 182 FDAKRLIGRK-FEDATVQADMKHWPS 256
+ K L+ E VQ +P+
Sbjct: 87 RNVKELLDTAGLESVLVQKYQSSYPA 112
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 679 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 569
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 679 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 533
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPBC32H8.03 |bem46||esterase/lipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = -1
Query: 530 TVSNRSSIGSLMIRRTFKP--EMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFI 357
T N+ I +L++ TF +M+P F Y G++I+ FCT + + I
Sbjct: 178 TAKNQDRISALILENTFTSIKDMIPTVF--------PYGGSIISRFCTEIWSSQDEIRKI 229
Query: 356 FVSTMELTSSGKKVLSSPLYATLILGL 276
+ S K + P L+ GL
Sbjct: 230 KKLPVLFLSGEKDEIVPPPQMVLLFGL 256
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 26.2 bits (55), Expect = 5.4
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = -2
Query: 754 ALLLVARSFLYFLLNSWTKWLTMRLSKSSPP-KWVSP--AVDFTSKIPSSMVRMDTSKVP 584
AL+ +A LY LLN K S SSPP SP FT S+ M +S P
Sbjct: 679 ALITIALDSLYVLLNMRAKSTPNSTSFSSPPTPHRSPFSGQAFTGMGLSNYSLMSSSSFP 738
Query: 583 PPRSK-ISTFRSPVPFLS 533
+S S F S P ++
Sbjct: 739 SAQSSPTSPFLSGTPSIA 756
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +3
Query: 531 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 701
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 715 LNSWTKWLTMRLSKSSPPKWVSPAVDF 635
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -3
Query: 561 HFVLQYPFCQDRKQSQQHRFIDDSENVQARDGTCIFCGLSLRVIEVRGNRDNCILHSFAK 382
H + Y C D + Q DDS+ + R G G LR I + +LH
Sbjct: 3 HLLFAYYLCNDIRSFQNLLKQDDSKVKEPRKGFSEKSGQKLR-INQKDRYGRTVLHIAVS 61
Query: 381 ISFGSFLH-FRKHHGTD 334
+ SF+ +H G D
Sbjct: 62 ENKNSFVRSLLQHKGID 78
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 176 TIFDAKRLIGRKFEDATVQADMKHWPSRLSVMEANLRS 289
T +D +L K E+ TVQA KH S ++ ME++L++
Sbjct: 235 TAYDYYKL-SLKVEELTVQASQKH--SHIAEMESSLQT 269
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 334 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 456
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 583 AVPSTCPSLPSRMVSSR*NPPPATPTW 663
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,539,289
Number of Sequences: 5004
Number of extensions: 76245
Number of successful extensions: 307
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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