Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30988
(794 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 166 2e-41
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 166 2e-41
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 1e-40
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 141 5e-34
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 90 2e-18
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 85 5e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 54 1e-07
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 31 0.81
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.4
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.5
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 30 2.5
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 29 3.3
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.3
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.3
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 3.3
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.3
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.3
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 5.7
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 29 5.7
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 166 bits (404), Expect = 2e-41
Identities = 75/84 (89%), Positives = 78/84 (92%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+
Sbjct: 8 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTV 67
Query: 182 FDAKRLIGRKFEDATVQADMKHWP 253
FDAKRLIGRKF+D V DM HWP
Sbjct: 68 FDAKRLIGRKFDDPVVARDMTHWP 91
Score = 153 bits (370), Expect = 2e-37
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+M
Sbjct: 178 AAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKM 237
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
V+HFV++FK+KYKKD+ NKRA+R
Sbjct: 238 VDHFVKQFKQKYKKDITPNKRAMR 261
Score = 142 bits (344), Expect = 3e-34
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +1
Query: 253 FEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 432
F V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+
Sbjct: 92 FHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFH 151
Query: 433 DSQRQATKDAGTISGLNVLRIINEP 507
DSQRQATKDAGTI+GLNVLRIINEP
Sbjct: 152 DSQRQATKDAGTIAGLNVLRIINEP 176
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 166 bits (403), Expect = 2e-41
Identities = 74/87 (85%), Positives = 83/87 (95%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTI
Sbjct: 8 GIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTI 67
Query: 182 FDAKRLIGRKFEDATVQADMKHWPSRL 262
FDAKRLIGR+++DATVQ+DMK WP ++
Sbjct: 68 FDAKRLIGRRYDDATVQSDMKLWPFKI 94
Score = 151 bits (365), Expect = 8e-37
Identities = 70/85 (82%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNR 686
AAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR
Sbjct: 178 AAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNR 237
Query: 687 MVNHFVQEFKRKYKKDLATNKRALR 761
+VNHFV EFKRKYKKD++ N RA+R
Sbjct: 238 LVNHFVAEFKRKYKKDMSKNSRAMR 262
Score = 142 bits (343), Expect = 4e-34
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +1
Query: 253 FEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 432
F+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFN
Sbjct: 92 FKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFN 151
Query: 433 DSQRQATKDAGTISGLNVLRIINEP 507
DSQRQATKDAGTI+GLNVLR+INEP
Sbjct: 152 DSQRQATKDAGTIAGLNVLRVINEP 176
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 163 bits (397), Expect = 1e-40
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTI 181
GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTI
Sbjct: 8 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTI 67
Query: 182 FDAKRLIGRKFEDATVQADMKHW 250
FDAKRLIGR+F+D V+ DMKHW
Sbjct: 68 FDAKRLIGRRFDDPGVKDDMKHW 90
Score = 146 bits (355), Expect = 1e-35
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN M
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNM 330
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
V+ FV++FK+KYKKD+ NKRALR
Sbjct: 331 VDFFVKQFKQKYKKDITPNKRALR 354
Score = 118 bits (285), Expect = 4e-27
Identities = 56/72 (77%), Positives = 63/72 (87%)
Frame = +1
Query: 250 AFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 429
A EVV++ G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYF
Sbjct: 116 AEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 175
Query: 430 NDSQRQATKDAG 465
NDSQRQATKDAG
Sbjct: 176 NDSQRQATKDAG 187
Score = 104 bits (249), Expect = 1e-22
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 331 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEP 507
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEP 269
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 141 bits (342), Expect = 5e-34
Identities = 69/106 (65%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNT 178
GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT
Sbjct: 705 GIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENT 764
Query: 179 IFDAKRLIGRKFEDATVQADMKHWPSRLSVMEANLRSR*HIRVKTK 316
+FDAKRLIGR ++D +VQ D+K +P V++ N + H++VK K
Sbjct: 765 VFDAKRLIGRSWDDTSVQNDLKFFP--FKVVDKNKKP--HVQVKVK 806
Score = 125 bits (301), Expect = 5e-29
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +1
Query: 253 FEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 432
F+VV KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFN
Sbjct: 790 FKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFN 849
Query: 433 DSQRQATKDAGTISGLNVLRIINEP 507
D+QRQATKDAG I+GL V+RIINEP
Sbjct: 850 DAQRQATKDAGAIAGLTVMRIINEP 874
Score = 117 bits (281), Expect = 1e-26
Identities = 51/84 (60%), Positives = 71/84 (84%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD +
Sbjct: 876 AAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNV 934
Query: 690 VNHFVQEFKRKYKKDLATNKRALR 761
+ HF++ +K+K K++ + RA++
Sbjct: 935 MEHFIKLYKKKKGKNIRKDNRAVQ 958
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +1
Query: 286 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 465
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 466 TISGLNVL 489
TI+GL+VL
Sbjct: 62 TIAGLDVL 69
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 86.2 bits (204), Expect = 3e-17
Identities = 36/67 (53%), Positives = 52/67 (77%)
Frame = +3
Query: 561 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 740
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 741 TNKRALR 761
+ AL+
Sbjct: 62 KDSMALQ 68
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/73 (52%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 175
GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q +NP N
Sbjct: 35 GIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKN 94
Query: 176 TIFDAKRLIGRKF 214
TI+DAKR IG+ F
Sbjct: 95 TIYDAKRFIGKTF 107
Score = 78.6 bits (185), Expect = 5e-15
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 689
AAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R
Sbjct: 208 AAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARF 266
Query: 690 VNHFVQEFKRKYKKDLATNKRALRL 764
+ + +Q +++ + L ++ RL
Sbjct: 267 MQYLLQLIHKRFNRQLTCSEDIQRL 291
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 FEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 429
F V +D G V KG PEE+ V+ K++ AE L TV AV++VPA F
Sbjct: 121 FRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEF 180
Query: 430 NDSQRQATKDAGTISGLNVLRIINEP 507
+ QR AT A +++G+ VLR+INEP
Sbjct: 181 DIKQRNATVKAASLAGITVLRVINEP 206
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +1
Query: 286 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 465
I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDAS 219
Query: 466 TISGLNVLRIINE 504
+GLN LR++N+
Sbjct: 220 ATAGLNCLRLMND 232
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 504 TDAAAIAYGLDKKGTGE---RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 674
T A ++AYG+ K+ RNV+ D+G + V I G +V STA + +LGG D
Sbjct: 233 TTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRD 292
Query: 675 FDNRMVNHFVQEFKRKYKKDLATNKRA 755
FD +V HF QEFK KYK D+ ++ +A
Sbjct: 293 FDYVLVEHFAQEFKTKYKIDVHSSIKA 319
Score = 48.0 bits (109), Expect = 9e-06
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 2 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 154
G D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 5 GFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 164 NPNNTIFDAKRLIGRKFEDATVQADMKHWPSRL 262
N NTI KR IGRKF D VQ ++ H P ++
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKV 150
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 280 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 459
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 460 AGTISGLNVLRIIN 501
A + GLNVL+I+N
Sbjct: 127 AAELVGLNVLQIMN 140
Score = 35.1 bits (77), Expect = 0.066
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Frame = +3
Query: 510 AAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------TIEDGIFE------VKS 641
A A+ YGL ++ T E++ + +D+G + +I+ T + GI E +K
Sbjct: 144 AVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKG 203
Query: 642 TAGDTHLGGEDFDNRMVNHFVQEFKRKYK 728
D LGG D R+ +H VQ FK+ YK
Sbjct: 204 IGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +3
Query: 552 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 719
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 720 -KYKKDLATNKRA 755
K+K D TNKR+
Sbjct: 213 WKWKIDPLTNKRS 225
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 50 GKVEIIANDQGNRTTPSYVAFTDTERLI 133
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 510 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 677
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 558 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 677
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = -2
Query: 742 VARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIS 563
V R+ + N+ +L +L P KW P D +S P V + + PP S
Sbjct: 336 VGRALGFERFNALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGS 394
Query: 562 TFRSPVPFLSRP 527
+ PF+S+P
Sbjct: 395 AKPATQPFVSQP 406
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 59 EIIANDQGNRTTPSYVAFT-DTERL 130
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 561 VLIFDLGGGTFDVSILTIEDGIFEVK 638
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 567 IFDLGGGTFDVSILTIEDGIFEV 635
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 67 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 237
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
Query: 238 HEALAFEV 261
+ A ++
Sbjct: 327 CGSAAGQI 334
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -2
Query: 742 VARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIS 563
V R+ + N+ + +L P KW D T I +V PPPR +
Sbjct: 543 VGRALGFERFNALGFYFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTA 602
Query: 562 TFRSPVPFLSRP 527
+ +PF+S+P
Sbjct: 603 KL-ATLPFVSQP 613
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 571 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 714
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 658 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 542
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 640 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 756
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 167 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 69
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 185 RILCCWGSSPPGSWRH 138
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 185 RILCCWGSSPPGSWRH 138
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 574 TSAAVPSTCPSLPSRMVSSR*NPPPATP 657
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 635 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSIGS 501
H+EDT DG DG E +E K + S SN+ GS
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDGS 530
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 112 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALAFEV 261
H R +R+ + GG +EP + R T T C+CA R+ + A ++
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAAGQI 473
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 332 SSGKKVLSSPLYATLILGLPPSLTTSKASA 243
S+ + LSSPLY T +PP + +KA A
Sbjct: 235 SATSEELSSPLYKTFFRTIPPDVNQAKAVA 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,776,728
Number of Sequences: 59808
Number of extensions: 628653
Number of successful extensions: 2125
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2117
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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