Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30987
         (793 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh...    35   2.0  
UniRef50_Q4AH47 Cluster: Putative uncharacterized protein precur...    33   6.2  
UniRef50_Q7RJN6 Cluster: Putative uncharacterized protein PY0322...    33   8.2  

>UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_28,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 579

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 356 LISKLCFKSKSLVVVNKCFNQIKFLIVFFSLF-*CNVINHGGQIVRVQTWK 505
           LI K C  +KS++  N C + + + I+F  LF  CN ++  GQ+ + +  K
Sbjct: 246 LIEKKCQNNKSIIFFNTCCSVVYYSIIFKQLFPDCNFLSMNGQMAQKKRQK 296


>UniRef50_Q4AH47 Cluster: Putative uncharacterized protein
           precursor; n=1; Chlorobium phaeobacteroides BS1|Rep:
           Putative uncharacterized protein precursor - Chlorobium
           phaeobacteroides BS1
          Length = 442

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 338 VLIFKSLISKLCFKSKSLVVVNKCFNQIKFLIVFFSLF*CNVINHGGQIVRVQTWKKYVH 517
           +LIF  +I K+    + ++  N    Q+KFLI FF      ++N    ++  +  KK  H
Sbjct: 117 ILIFGEIIPKILANKEPMMFANLMVTQLKFLIYFFKPLSSLLVN-STNLIDKKVKKKGHH 175

Query: 518 LQFNECTD 541
           +  ++ +D
Sbjct: 176 ISMSDLSD 183


>UniRef50_Q7RJN6 Cluster: Putative uncharacterized protein PY03223;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03223 - Plasmodium yoelii yoelii
          Length = 496

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 216 VNFLDDIRLNNNHNHSKICGNIIDIGVVHLNLLANDILTY 335
           +NFL+    NNN+N++K    +I++G     L  N+I TY
Sbjct: 196 INFLNIFISNNNNNNNKALKELINVGKYRGKLFLNNIPTY 235


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,210,607
Number of Sequences: 1657284
Number of extensions: 10111613
Number of successful extensions: 19690
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19682
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)