Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30983
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...   159   2e-39
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    34   0.13 
CU457740-7|CAM36337.1|  363|Caenorhabditis elegans Hypothetical ...    31   0.93 
U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC024211-4|AAP82631.1|  487|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z70682-5|CAA94586.1|  345|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AF067608-5|AAK95865.1|  523|Caenorhabditis elegans Hypothetical ...    28   8.7  

>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score =  159 bits (386), Expect = 2e-39
 Identities = 67/85 (78%), Positives = 82/85 (96%)
 Frame = +3

Query: 255 KITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKV 434
           K+TLEVAK++KDDFLQQN Y+ YDRFCPFYKTVGMLKN+I FYD++RHAVE+TAQSDNK+
Sbjct: 495 KVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLKNMIGFYDLARHAVEATAQSDNKI 554

Query: 435 TWNVIRDAMGNVLYQLSSMKFKDPV 509
           TWNVI+D+MG+++YQLS+MKFKDPV
Sbjct: 555 TWNVIKDSMGDLIYQLSAMKFKDPV 579



 Score =  159 bits (385), Expect = 3e-39
 Identities = 74/86 (86%), Positives = 82/86 (95%)
 Frame = +1

Query: 1   VTAATLGIVQVFWGLDKKLAHGEHFPSINWLISYSKYMRALDDFYEKNYPEFVPLRTKVK 180
           VT+ATLGIVQVFWGLDKKLA  +HFPSINWLISYS+YMRAL++FYEKNYPEFV LRTK K
Sbjct: 410 VTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNYPEFVSLRTKCK 469

Query: 181 EILQEEEDLSEIVQLVGKASLAETER 258
           EILQEEEDLSEIVQLVGKASLAE+++
Sbjct: 470 EILQEEEDLSEIVQLVGKASLAESDK 495



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +2

Query: 503 PSKDGEPKIKADFDQLLEDMSAAFRNLED 589
           P  DGE KI+ D++ L E M+ AFRNLED
Sbjct: 578 PVADGEAKIRKDYEDLAEAMANAFRNLED 606


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = +2

Query: 353 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 463
           GH  EHHH   H    G  H A    GH   H   HG
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHG 492



 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
 Frame = +2

Query: 353 GHAEEHHHVLRHVAARG-----GVH-GAVRQQGHVERHPRRHGQRALPALLHEVQG 502
           GH  EHHH   H    G     GVH G     GH    P  HG      + H   G
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
 Frame = +2

Query: 353 GHAEEHHHVLRHVAARG--GVHGAVRQQGHVERHPRRHGQ 466
           GH  EHHH   H    G  G H       H   H   HG+
Sbjct: 527 GHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE 566



 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 353 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 463
           GH  EHHH   H       HG     GH    P  HG
Sbjct: 427 GHHGEHHHAPAH-------HGHHESHGHGHHSPAHHG 456


>CU457740-7|CAM36337.1|  363|Caenorhabditis elegans Hypothetical
           protein C50E10.7 protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -3

Query: 717 IIFATTHKISFGHSEYFLFTLKLISVNFSVSITIIF*RQYSV*SSRLRK 571
           IIF TT+ I F   ++    + L+ +N S  I     RQYS+   RL K
Sbjct: 175 IIFTTTYLIFFNKLQFIPIIIFLVVINTSAMIGFFLNRQYSLKILRLFK 223


>U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical
           protein F53A9.7 protein.
          Length = 85

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +2

Query: 353 GHAEEHHHVLRHVAAR-GGVHGAVRQQGHVERHPRRHG 463
           GH + HHH   H     GG HG    + H E H   HG
Sbjct: 44  GHVDTHHHEESHHGEHHGGHHGVQHYESHHESH--HHG 79


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 353 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 463
           GH     H   H   R G HG      H  R P RHG
Sbjct: 378 GHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414


>AC024211-4|AAP82631.1|  487|Caenorhabditis elegans Hypothetical
           protein Y76B12C.6 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 401 GGVHGAVRQQGHVERHPRRHGQR 469
           GG+HGA +QQ  V + P  H Q+
Sbjct: 443 GGIHGAQQQQQAVRKRPDSHQQQ 465


>Z70682-5|CAA94586.1|  345|Caenorhabditis elegans Hypothetical
           protein F08G5.6 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 270 VAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKVT 437
           VAK      +  + ++ YD    F+   G L+N +  Y M++   ++     NKVT
Sbjct: 165 VAKERMSISIAYSGWTPYDNLYNFFLIEGDLENPLAIYRMTQFLYQNYISKGNKVT 220


>Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 738 CCDDKIS--IIFATTHKISFGHSEYFLFTLKLI 646
           CC D +   +IF+ T  ++F H  +FL  +K I
Sbjct: 226 CCFDNVVSLLIFSVTSSVTFTHDAFFLTMVKSI 258


>Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 738 CCDDKIS--IIFATTHKISFGHSEYFLFTLKLI 646
           CC D +   +IF+ T  ++F H  +FL  +K I
Sbjct: 226 CCFDNVVSLLIFSVTSSVTFTHDAFFLTMVKSI 258


>AF067608-5|AAK95865.1|  523|Caenorhabditis elegans Hypothetical
           protein B0511.8 protein.
          Length = 523

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = +1

Query: 13  TLGIVQVFWGLDKKLAHGEHFPSINWLISYSKYMRALDDFYEKNYPEFVPLRTKVKEILQ 192
           TL   +  WG+    AH +      +L        +LDDFY    P    L+T  +  L+
Sbjct: 132 TLMATRKAWGIPPTPAHFDTLDYYKYLTKTRVENESLDDFYHGLRPPTADLQTSFQNTLK 191

Query: 193 EEE 201
             E
Sbjct: 192 SME 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,057,075
Number of Sequences: 27780
Number of extensions: 270061
Number of successful extensions: 1059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)