Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30980
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   3.7  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.5  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   8.5  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 602 KCMEPPLPREQPVLRPVSSESTPS 531
           KC +P  P   PV +PVS ES P+
Sbjct: 36  KCPKPA-PIYSPVSKPVSFESLPN 58


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 632 PLPP*KLRPYKCMEPPLPREQPVLRPVSS 546
           PL P +    K   PP P  QP   PV +
Sbjct: 724 PLTPHEAFDVKLPPPPHPHHQPPRNPVGT 752


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 632 PLPP*KLRPYKCMEPPLPREQPVLRPVSS 546
           PL P +    K   PP P  QP   PV +
Sbjct: 616 PLTPHEAFDVKLPPPPHPHHQPPRNPVGT 644


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 659 PNGTCAPTIPLPP*KLRPYKCMEPP 585
           PN     T  LP   LR + CME P
Sbjct: 486 PNSCALTTRELPGETLRLFTCMECP 510


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 659 PNGTCAPTIPLPP*KLRPYKCMEPP 585
           PN     T  LP   LR + CME P
Sbjct: 493 PNSCALTTRELPGETLRLFTCMECP 517


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 185 ESDCTGCSDKRK 220
           E+DC+ CS+K+K
Sbjct: 74  ETDCSKCSEKQK 85


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 185 ESDCTGCSDKRKIQHEK 235
           +SDC  CS+K+K   +K
Sbjct: 67  KSDCAKCSEKQKEMTKK 83


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 244 VASFFVLYFAFVATTGAVTFVI 179
           V  F+V+  AF+ T GA+  ++
Sbjct: 100 VQKFYVVILAFLLTAGAIISLV 121


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 244 VASFFVLYFAFVATTGAVTFVI 179
           V  F+V+  AF+ T GA+  ++
Sbjct: 26  VQKFYVVILAFLLTAGAIISLV 47


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 581 PREQPVLRPVSSESTPSTLTPM 516
           PREQP++      +TP  L  M
Sbjct: 44  PREQPIVAMFEVNNTPEILQLM 65



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 608 PYKCMEPPLPREQPVLRPVSSE 543
           PYK +  P P    +  PV++E
Sbjct: 431 PYKIIAKPHPNTYQIADPVTNE 452


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 271 MEFVGLISNVASFFVLYFAFVATTGAVTFVIVFPAKNL 158
           ++F+ +++ +  FFV+  A V + G   F+     KN+
Sbjct: 57  VKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNV 94


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 271 MEFVGLISNVASFFVLYFAFVATTGAVTFVIVFPAKNL 158
           ++F+ +++ +  FFV+  A V + G   F+     KN+
Sbjct: 57  VKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNV 94


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 604 YGRNFYGGNGIVGAQ 648
           YGR+F+  N IVG++
Sbjct: 39  YGRHFFKKNLIVGSE 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,229
Number of Sequences: 336
Number of extensions: 4192
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)