Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30980
(792 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15625| Best HMM Match : E1_dh (HMM E-Value=0) 135 4e-32
SB_47852| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.087
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 31 1.4
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 30 2.5
SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39772| Best HMM Match : BAR (HMM E-Value=1.7) 29 4.3
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 4.3
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 4.3
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 4.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.7
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.7
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 29 5.7
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_50618| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00017) 28 7.5
SB_7425| Best HMM Match : MAM (HMM E-Value=0.45) 28 7.5
SB_42271| Best HMM Match : DUF229 (HMM E-Value=0) 28 10.0
SB_12512| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_4364| Best HMM Match : E1_dh (HMM E-Value=3.1e-13) 28 10.0
SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 28 10.0
SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_15625| Best HMM Match : E1_dh (HMM E-Value=0)
Length = 352
Score = 135 bits (326), Expect = 4e-32
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1
Query: 511 YLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYR 690
Y+ G S VL ELTGR+TGC++GKGGSMH+YG +YGGNGIVGAQVPLGAG+A AHK R
Sbjct: 86 YMRGRSAREVLCELTGRKTGCTQGKGGSMHMYGHEYYGGNGIVGAQVPLGAGIALAHKLR 145
Query: 691 ADGGVTFALYGDGAANQGQLFEAY 762
+G + LYGDGAANQGQLFE Y
Sbjct: 146 GNGRICLTLYGDGAANQGQLFETY 169
Score = 120 bits (288), Expect = 2e-27
Identities = 52/83 (62%), Positives = 62/83 (74%)
Frame = +2
Query: 260 YKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 439
Y LHK+ GP A +T E+ L Y Q+ I+RR+ETA+ NLYK K+IRGFCHLYSGQEA
Sbjct: 2 YTLHKITDGPPGKAVMTREEGLTYYRQMQIVRRMETAASNLYKSKVIRGFCHLYSGQEAC 61
Query: 440 AVGMRAAMRDADSVITAYRCHGW 508
VGM A++ DSVITAYRCHGW
Sbjct: 62 CVGMEASIDKNDSVITAYRCHGW 84
>SB_47852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 34.7 bits (76), Expect = 0.087
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 173 KHNHESDCTGCSDKRKIQHEKRGDIRNQPYKLHKLDQGPATSATLTSEDALKLYEQLTIL 352
+HN E C+ C + K+ + +G R PYK H PA L S + K+ LT++
Sbjct: 3 QHNGEYGCSTCEEPGKVVKQGKGHTRCYPYKEH-----PAPKKKLLSHSS-KMKMMLTVV 56
Query: 353 RR 358
R+
Sbjct: 57 RK 58
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 641 PTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTP 519
PT LP PY +E P+P +P+ R ++ ++ S+ +P
Sbjct: 125 PTYALPSESRLPYPHLETPVPMAEPLTREEATATSTSSTSP 165
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = -1
Query: 741 LIGGSVSVQSERDSPVGAVLVGEGHSGSQRNLRTNNPVATIEVASVQMHGTSLAPGATGP 562
LI G + E G+ LV Q NL+ N + + + V G L PG P
Sbjct: 816 LITGQGETEEEALRDYGSNLVTMRERARQVNLKLNPKMLKLRLPEVPYIGHLLTPGGVKP 875
Query: 561 APRQLR 544
P ++R
Sbjct: 876 DPEKVR 881
>SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = -1
Query: 741 LIGGSVSVQSERDSPVGAVLVGEGHSGSQRNLRTNNPVATIEVASVQMHGTSLAPGATGP 562
LI G + E G+ LV Q NL+ N + + + V G L PG P
Sbjct: 71 LITGQGETEEEALRDYGSNLVTMRERARQVNLKLNPKMLKLRLPEVPYIGHLLTPGGVKP 130
Query: 561 APRQLR 544
P ++R
Sbjct: 131 DPEKVR 136
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 512 ISWALVCWGCSRS*RGAGPVAPGAREVPCICTDATSMVATGLLVRRFRWEPEW---PSPT 682
I + L CWGC +G G VA G +E T ++V VR+ P W PSP
Sbjct: 825 IFFPLKCWGCD---KGFGFVAQGGKENITKNTPTRAVVKPN--VRQSPKPPSWKSQPSP- 878
Query: 683 STAPTGESRSLCTETEP 733
S P S+ L + P
Sbjct: 879 SARPQVNSKPLSLKPVP 895
>SB_39772| Best HMM Match : BAR (HMM E-Value=1.7)
Length = 210
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 544 SELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLG 660
+E+ G+R G G ++G+ YGG+G +G LG
Sbjct: 131 AEIWGKRKYWGSGNMGEAEIWGKRKYGGSGNMGEAEILG 169
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = -2
Query: 710 NVTPPSARYLWAKATPAPNGTCAPTIP---LPP*KLRPYKCMEPPLPREQPVLRPVSSES 540
N TPP+ T P T PT P PP P K P +P ++ +
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTT-T 124
Query: 539 TPSTLTPMR 513
P T TP +
Sbjct: 125 PPGTTTPTK 133
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = -2
Query: 704 TPPSARYLWAKATPAPNGTCAPTIP---LPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 534
TPP+ T P GT PT P PP P K P +P ++ + P
Sbjct: 110 TPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTT-TPP 168
Query: 533 STLTPMR 513
+T TP +
Sbjct: 169 ATTTPTK 175
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -2
Query: 665 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPR-EQPVLRPVSSESTPSTLTPM 516
P P P +PLPP +L PP +QP L P S P TPM
Sbjct: 467 PPPPAPALPPLPLPP-ELPGSPGDSPPATSPKQPPLPPKHSNGPPLRQTPM 516
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -2
Query: 674 KATPAPNGTCAPTIP--LPP*KL--RPYKCMEPPLPREQPVLR 558
+ +P N T +P IP PP K PY CMEPP P + +R
Sbjct: 23 RLSPRSNSTPSPGIPSPFPPSKSPDSPY-CMEPPKPTPKESMR 64
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 671 ATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 534
ATP P +PLPP LR + PP P +P P S+ S P
Sbjct: 316 ATPPPPPPSRDQVPLPPPPLRG-QIAPPPPPISKP---PTSTRSAP 357
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/74 (32%), Positives = 29/74 (39%)
Frame = +1
Query: 559 RRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYRADGGVTFALYGDGAAN 738
R G RG GG YG YGG G G G G +A + G + Y G N
Sbjct: 203 RGRGGPRGGGGGSGGYGGGSYGGYGNYGGYSQGGYG-GYADNSWSGG---YGSYDGGYGN 258
Query: 739 QGQLFEAYTCLNYG 780
G Y+ +YG
Sbjct: 259 GGDYSNGYS--SYG 270
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 671 ATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 534
ATP P +PLPP LR + PP P +P P S+ S P
Sbjct: 228 ATPPPPPPSRDQVPLPPPPLRG-QIAPPPPPISKP---PTSTRSAP 269
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 671 ATPAPNGTCAPTIPLPP*KLRPYKCMEPP-LPREQPVLRPVSSESTPSTLTP 519
A AP G P PP K + C PP P + ++++PST +P
Sbjct: 265 ADNAPAGGLVTAAPSPPDKKQSSVCHTPPKTPSSKTTPADAETKTSPSTTSP 316
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 588 RFHAFVRTQLLWWQRDCWCAGSV 656
R+H T + WQ DC C G+V
Sbjct: 226 RYHDMGITHMFQWQADCLCTGNV 248
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -2
Query: 674 KATPAPNGTCAPTIPLP---P*KLRPYKCMEPPLPREQPVLRPVSSESTPST 528
+ TP P + T P P P + +P EPP +P P+ + P+T
Sbjct: 1106 RTTPEPTTEPSRTKPEPTTEPSRTKPEPTTEPPRTTSEPTTEPLRTTPEPTT 1157
>SB_50618| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00017)
Length = 748
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = -1
Query: 753 EELTLIGGSVSVQSERDSPVGAVLVGEGHSGSQRNLRTNNPVATIEVASVQMHGTSLAPG 574
+++ + G + ++ RD G+ LV Q NL+ N + + + V G L PG
Sbjct: 620 DDILITGRGETEEALRD--YGSNLVTMRERARQVNLKLNPKMLKLRLPEVPYIGHLLTPG 677
Query: 573 ATGPAPRQLR 544
P P ++R
Sbjct: 678 GVKPDPEKVR 687
>SB_7425| Best HMM Match : MAM (HMM E-Value=0.45)
Length = 300
Score = 28.3 bits (60), Expect = 7.5
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -1
Query: 714 SERDSPVGAVLVGEGHSGSQRNLRTNNPVATIEVASVQMHGTSLAPGATGPAPRQLREHP 535
S R SP+G +++G G +G + TN + M+G +L + Q+ +H
Sbjct: 9 SNRSSPLGEIMIGRGVAGYNLTINTN----------MAMYGLTLFNNEL--SAEQVMDH- 55
Query: 534 QHTNAHEISHP*QRYAVITESASRIAALIPTATASCPEYR 415
+TN +S P Y T+ S AL+PT +YR
Sbjct: 56 VNTNDGSMSMP-GGYPKGTKFQSISIALLPTYNCVSFKYR 94
>SB_42271| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 591
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 671 PSPTSTAPTGESRSLCTETEPPIRVNSSKP 760
P P +T T S SL T T PP S P
Sbjct: 49 PPPPTTTTTTPSLSLSTSTSPPFSYKSPDP 78
>SB_12512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 418 VFRTRSRGSRYESSDARCRLSDHRVSLSRMAYLMGVSVLGVLSELTGRRTGCSRGKGGSM 597
V+ + G+ YE + CR+ + +S+ AY + ++ E GRR CS K
Sbjct: 194 VYHSLESGNGYEGLASFCRVMN-MPCVSKAAYYKQLDIIVNAQEEEGRREMCSAAKRLRQ 252
Query: 598 HLYG 609
L G
Sbjct: 253 KLIG 256
>SB_4364| Best HMM Match : E1_dh (HMM E-Value=3.1e-13)
Length = 238
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 646 QVPLGAGVAFAHKYRADGGVTFALYGDGAANQGQLFEAYTCLNYGTCL 789
QVP +G +A + + V +G+GAA++G + T LN+ L
Sbjct: 3 QVPQASGSGYAFRTANEDKVAACYFGEGAASEG---DFPTALNFAATL 47
>SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 418 VFRTRSRGSRYESSDARCRLSDHRVSLSRMAYLMGVSVLGVLSELTGRRTGCSRGKGGSM 597
V+ + G+ YE + CR+ + +S+ AY + ++ E GRR CS K
Sbjct: 184 VYHSLESGNGYEGLASFCRVMN-MPCVSKAAYYKQLDIIVNAQEEEGRREMCSAAKRLRQ 242
Query: 598 HLYG 609
L G
Sbjct: 243 KLIG 246
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 263 CRADFECRLFFRAVFCVCRYNRCSHFR 183
CR + EC++FF+ CV + C +
Sbjct: 136 CRPNQECKVFFQRARCVLKRKTCEEMK 162
>SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 418 VFRTRSRGSRYESSDARCRLSDHRVSLSRMAYLMGVSVLGVLSELTGRRTGCSRGKGGSM 597
V+ + G+ YE + CR+ + +S+ AY + ++ E GRR CS K
Sbjct: 184 VYHSLESGNGYEGLASFCRVMN-MPCVSKAAYYKQLDIIVNAQEEEGRREMCSAAKRLRQ 242
Query: 598 HLYG 609
L G
Sbjct: 243 KLIG 246
>SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 418 VFRTRSRGSRYESSDARCRLSDHRVSLSRMAYLMGVSVLGVLSELTGRRTGCSRGKGGSM 597
V+ + G+ YE + CR+ + +S+ AY + ++ E GRR CS K
Sbjct: 184 VYHSLESGNGYEGLASFCRVMN-MPCVSKAAYYKQLDIIVNAQEEEGRREMCSAAKRLRQ 242
Query: 598 HLYG 609
L G
Sbjct: 243 KLMG 246
>SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 726 VSVQSERDSPVGAVLVGEGHSGSQRNLRTNNPVATI 619
VS+QS S +G + G S +++TNNP +
Sbjct: 1199 VSIQSNGQSTLGVSIQSNGQSTLDVSIQTNNPTTLV 1234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,109,147
Number of Sequences: 59808
Number of extensions: 544659
Number of successful extensions: 1873
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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